Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3360

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3359: 11727 - Hypothetical Protein, at 492217 to 492797 11727 mRNA_3360: 11728 - KOG4836 Uncharacterized conserved protein, at 493196 to 494520 11728 mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494941 to 495602 11729

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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492,229 - 0.1
492,243 - -0.6
492,307 + 11727 mRNA_3359 0.15 0.5
492,323 + 11727 mRNA_3359 0.18 0.0
492,339 + 11727 mRNA_3359 0.21 -0.8
492,805 + -0.7
493,077 + 0.4
493,444 - 11728 mRNA_3360 0.19 0.4
493,688 - 11728 mRNA_3360 0.37 -0.1
493,879 - 11728 mRNA_3360 0.52 -0.0
493,928 - 11728 mRNA_3360 0.55 -0.5
494,204 - 11728 mRNA_3360 0.76 0.9
494,214 - 11728 mRNA_3360 0.77 0.2
494,245 - 11728 mRNA_3360 0.79 0.1
494,269 - 11728 mRNA_3360 0.81 0.7
494,398 - 0.6
494,407 - -0.4
494,414 - -1.3
494,534 + -0.2
494,547 - -0.1
494,572 + -0.4
494,846 + 1.1
495,112 - 11729 mRNA_3361 0.26 -0.5
495,158 + 11729 mRNA_3361 0.33 0.7
495,239 - 11729 mRNA_3361 0.45 -0.3
495,284 + 11729 mRNA_3361 0.52 -0.3