Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3115

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3114: 11482 - BLAST c6 zinc finger domain containing protein [Diplodia co..., at 354324 to 355899 11482 mRNA_3115: 11483 - Hypothetical Protein, at 356182 to 356910 11483 mRNA_3116: 11484 - BLAST Pogo transposable element [Larimichthys crocea], at 356999 to 357616 11484 mRNA_3117: 11485 - KOG1110 Putative steroid membrane receptor Hpr6.6/25-Dx, at 357751 to 358834 11485

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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355,242 + 11482 mRNA_3114 0.58 -0.7
355,382 + 11482 mRNA_3114 0.67 -0.5
355,531 - 11482 mRNA_3114 0.77 -0.4
355,534 - 11482 mRNA_3114 0.77 2.1
355,542 - 11482 mRNA_3114 0.77 -0.9
355,547 + 11482 mRNA_3114 0.78 0.3
355,807 + 0.0
355,826 + 0.2
355,832 + 0.0
355,971 - 1.7
355,978 + 0.1
355,981 + 0.1
355,982 + -0.4
356,010 + -1.1
356,111 - -0.4
356,130 + -0.0
356,131 + -0.6
356,259 - 11483 mRNA_3115 0.11 1.2
356,262 - 11483 mRNA_3115 0.11 0.1
356,282 - 11483 mRNA_3115 0.14 0.9
356,358 - 11483 mRNA_3115 0.24 -0.3
356,415 + 11483 mRNA_3115 0.32 0.5
356,571 + 11483 mRNA_3115 0.53 0.7
356,577 + 11483 mRNA_3115 0.54 1.0
356,579 + 11483 mRNA_3115 0.54 1.0
356,732 - 11483 mRNA_3115 0.75 0.6
356,839 - 0.5
356,990 - -0.8
357,161 + 11484 mRNA_3116 0.26 0.2
357,164 - 11484 mRNA_3116 0.27 0.1
357,196 + 11484 mRNA_3116 0.32 1.0
357,287 - 11484 mRNA_3116 0.47 1.6
357,305 + 11484 mRNA_3116 0.50 1.1
357,306 + 11484 mRNA_3116 0.50 -0.7
357,356 - 11484 mRNA_3116 0.58 1.4
357,426 + 11484 mRNA_3116 0.69 -0.1
357,578 - 0.0
357,582 - 0.3
357,604 - 1.1
357,610 - 0.2
357,643 - 0.6
357,705 + -1.3
357,757 + 0.6