Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3101

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3101: 11469 - K01490 AMPD AMP deaminase, at 321739 to 325524 11469 mRNA_3102: 11470 - BLAST mannoprotein [Rhizoctonia solani AG-1 IA], at 325747 to 328243 11470

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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320,883 - 0.2
320,888 + 0.2
321,003 + 0.9
321,170 + 0.1
321,199 + 0.7
321,208 + 0.3
321,210 + -0.9
321,210 + 0.4
321,220 + -1.2
321,262 - -0.2
321,265 - 0.5
321,270 - -0.0
321,270 - -0.4
321,274 + -0.4
321,275 + 0.3
321,279 + -0.3
321,338 + -0.8
321,484 + 0.1
321,492 + 0.2
321,762 - 0.6
321,792 + 0.9
321,921 - 0.5
321,923 + -0.0
321,932 + 0.2
322,391 - 11469 mRNA_3101 0.17 -1.5
322,396 - 11469 mRNA_3101 0.17 0.2
322,516 - 11469 mRNA_3101 0.21 0.9
322,517 + 11469 mRNA_3101 0.21 -1.7
322,656 + 11469 mRNA_3101 0.24 0.3
322,847 + 11469 mRNA_3101 0.29 -0.3
322,865 - 11469 mRNA_3101 0.30 -1.5
323,103 + 11469 mRNA_3101 0.36 0.1
323,365 + 11469 mRNA_3101 0.43 0.0
323,668 - 11469 mRNA_3101 0.51 -0.6
323,936 + 11469 mRNA_3101 0.58 0.1
324,112 - 11469 mRNA_3101 0.63 -0.4
324,135 + 11469 mRNA_3101 0.63 -2.0
324,393 + 11469 mRNA_3101 0.70 0.6
324,516 - 11469 mRNA_3101 0.73 -1.2
324,550 - 11469 mRNA_3101 0.74 1.0
324,799 - 11469 mRNA_3101 0.81 0.4
324,964 - 11469 mRNA_3101 0.85 1.6
324,971 + 11469 mRNA_3101 0.85 0.1
325,072 + 11469 mRNA_3101 0.88 -0.0
325,117 + 11469 mRNA_3101 0.89 0.1
325,139 + 11469 mRNA_3101 0.90 0.2
325,143 + 11469 mRNA_3101 0.90 0.3
325,252 - -0.0
325,291 + 0.9
325,413 - -0.5
325,413 - -0.1
325,421 - 0.0
325,435 + -0.3
325,445 - 1.1
325,534 - 0.0
325,557 + -0.3
325,558 - 0.2
325,559 - 0.7
325,561 - 1.1
325,562 - -1.5
325,568 - -4.8
325,568 - -0.3
325,572 + 0.3
325,575 - 0.4
325,577 - -0.2
325,579 - 0.6
325,581 - -0.5
325,595 - 1.6
325,595 - -0.3
325,595 - -1.1
325,596 + -0.1
325,601 + 0.1
325,603 - 0.9
325,722 + 0.3
325,735 - 1.4
325,750 - 0.5
325,762 - -0.0
325,763 - -0.5
325,763 - -0.5
325,763 - -0.2
325,763 - -0.1
325,763 - -1.3
325,763 - -0.8
325,764 - -0.2
325,768 + -1.0
325,768 - -0.1
325,769 - 0.1
325,770 + 0.6
325,771 + 0.7
325,772 + -0.3
325,772 - -0.6
325,775 + 0.1
325,777 + 0.4
325,786 - -0.2
325,795 + -0.8
325,804 - 0.9
325,823 + -0.5
325,871 + 1.8
325,874 - -0.1
325,891 + 0.4
325,894 - 0.7
325,902 + -0.0
325,903 - -1.3
325,904 + -0.6
325,906 - 0.4
325,909 + 0.6
325,918 - -0.1
325,918 - 0.9
325,921 - -0.5
325,922 + -0.6
325,922 + -0.1
325,923 - -1.6
325,924 + -0.2
325,928 + 0.7
325,929 + -0.3
325,930 - 0.5
325,932 - -0.2
325,935 - -0.8
325,936 + -0.3
325,944 + 0.7
325,946 - 0.5
325,950 + -0.5
325,952 + -0.5
325,953 - -0.5
325,957 - -0.4
326,077 - 11470 mRNA_3102 0.13 0.8
326,078 - 11470 mRNA_3102 0.13 -0.8
326,084 + 11470 mRNA_3102 0.13 0.3
326,089 - 11470 mRNA_3102 0.14 -0.3
326,090 - 11470 mRNA_3102 0.14 -0.5
326,091 - 11470 mRNA_3102 0.14 -0.6
326,095 - 11470 mRNA_3102 0.14 0.2
326,096 - 11470 mRNA_3102 0.14 -0.1
326,101 + 11470 mRNA_3102 0.14 -0.6
326,101 + 11470 mRNA_3102 0.14 -0.3
326,117 + 11470 mRNA_3102 0.15 -0.0
326,122 + 11470 mRNA_3102 0.15 -0.1
326,221 + 11470 mRNA_3102 0.19 -0.8
326,223 - 11470 mRNA_3102 0.19 0.9
326,226 - 11470 mRNA_3102 0.19 0.1
326,235 - 11470 mRNA_3102 0.20 0.4
326,249 + 11470 mRNA_3102 0.20 -0.5
326,251 - 11470 mRNA_3102 0.20 0.2
326,263 + 11470 mRNA_3102 0.21 -1.1
326,270 + 11470 mRNA_3102 0.21 0.2
326,294 + 11470 mRNA_3102 0.22 -0.2
326,306 + 11470 mRNA_3102 0.22 0.8
326,405 + 11470 mRNA_3102 0.26 1.5
326,417 - 11470 mRNA_3102 0.27 -0.2
326,498 + 11470 mRNA_3102 0.30 -0.6
326,513 + 11470 mRNA_3102 0.31 0.4