Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3092

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3091: 11459 - K13303 SGK2 serum/glucocorticoid-regulated kinase 2, at 296743 to 299433 11459 mRNA_3092: 11460 - KOG4784 Uncharacterized conserved protein, at 300048 to 303992 11460 mRNA_3093: 11461 - Hypothetical Protein, at 304363 to 305282 11461

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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299,218 + -0.4
299,324 - 1.1
299,349 - 0.1
299,472 + 0.6
299,478 - -0.8
299,512 + 0.4
299,627 - -0.7
299,627 - 0.2
299,627 - 1.1
299,633 + -0.2
299,637 - 0.8
299,638 - -0.0
299,638 + 0.7
299,644 + 0.1
299,644 - -0.8
299,648 + -0.0
299,656 - -0.8
299,656 - -0.7
299,783 + 2.3
299,797 + -1.9
299,906 - -0.8
299,974 + 0.4
300,098 - 0.6
300,099 + -0.5
300,110 + 0.4
300,223 - -0.1
300,228 - -0.0
300,246 + -2.0
300,251 + -0.5
300,349 + -0.5
300,531 + 11460 mRNA_3092 0.12 0.7
300,662 + 11460 mRNA_3092 0.16 0.2
300,680 + 11460 mRNA_3092 0.16 -0.0
300,683 - 11460 mRNA_3092 0.16 0.0
300,724 + 11460 mRNA_3092 0.17 -0.3
300,843 + 11460 mRNA_3092 0.20 0.0
300,992 - 11460 mRNA_3092 0.24 -0.1
301,130 - 11460 mRNA_3092 0.27 0.1
301,136 - 11460 mRNA_3092 0.28 0.7
301,154 + 11460 mRNA_3092 0.28 0.2
301,158 + 11460 mRNA_3092 0.28 0.1
301,326 + 11460 mRNA_3092 0.32 -0.1
301,427 + 11460 mRNA_3092 0.35 0.0
301,432 - 11460 mRNA_3092 0.35 -1.3
301,433 + 11460 mRNA_3092 0.35 0.6
301,434 + 11460 mRNA_3092 0.35 2.5
301,587 - 11460 mRNA_3092 0.39 0.4
301,597 + 11460 mRNA_3092 0.39 -1.3
301,687 - 11460 mRNA_3092 0.42 1.3
301,729 - 11460 mRNA_3092 0.43 -0.1
301,864 - 11460 mRNA_3092 0.46 0.6
302,350 - 11460 mRNA_3092 0.58 1.7
302,428 + 11460 mRNA_3092 0.60 0.5
302,600 - 11460 mRNA_3092 0.65 0.3
302,747 + 11460 mRNA_3092 0.68 0.3
302,892 + 11460 mRNA_3092 0.72 0.1
302,902 + 11460 mRNA_3092 0.72 0.4
303,036 - 11460 mRNA_3092 0.76 -0.4
303,178 - 11460 mRNA_3092 0.79 0.1
303,285 - 11460 mRNA_3092 0.82 -0.5
303,328 - 11460 mRNA_3092 0.83 -0.7
303,353 + 11460 mRNA_3092 0.84 0.3
303,449 - 11460 mRNA_3092 0.86 0.2
303,458 + 11460 mRNA_3092 0.86 0.5
303,460 + 11460 mRNA_3092 0.86 -0.5
303,477 + 11460 mRNA_3092 0.87 -0.8
303,576 + 11460 mRNA_3092 0.89 -2.0
303,606 - 0.1
303,607 + 0.7
303,610 - 0.6
303,614 - -0.1
303,643 + 0.6
303,744 - 0.8
303,748 - -0.5
303,749 + 0.1
303,760 - -0.1
303,760 + 0.9
303,766 + -0.2
303,891 - -0.3
303,898 - -1.3
304,033 + -0.1
304,038 - 0.6
304,038 + -0.1
304,041 - 0.0
304,045 - -0.7
304,046 + -1.4
304,052 + 0.8
304,054 - 0.6
304,166 - 0.1
304,222 + -0.5
304,371 + 0.6
304,445 + -0.0
304,482 + 11461 mRNA_3093 0.13 0.2
304,494 + 11461 mRNA_3093 0.14 0.4
304,599 + 11461 mRNA_3093 0.26 0.0
304,609 - 11461 mRNA_3093 0.27 -0.2
304,687 - 11461 mRNA_3093 0.35 -0.8
304,695 + 11461 mRNA_3093 0.36 1.4
304,753 + 11461 mRNA_3093 0.42 -0.2
304,926 - 11461 mRNA_3093 0.61 0.7
304,959 + 11461 mRNA_3093 0.65 0.1