Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
1 + 1.0
1 + -0.6
1 + -0.6
21 + 1.6
21 + 1.0
21 + -1.1
41 + 0.3
42 + -0.3
44 + 1.9
79 - 0.4
79 + -0.4
149 - 2.7
264 + 11348 mRNA_2980 0.17 1.6
266 - 11348 mRNA_2980 0.17 0.5
338 - 11348 mRNA_2980 0.22 0.2
341 + 11348 mRNA_2980 0.22 0.5
454 - 11348 mRNA_2980 0.30 0.5
484 - 11348 mRNA_2980 0.32 -1.4
489 - 11348 mRNA_2980 0.33 0.6
491 + 11348 mRNA_2980 0.33 0.6
507 + 11348 mRNA_2980 0.34 1.9
510 + 11348 mRNA_2980 0.34 0.1
516 - 11348 mRNA_2980 0.35 -0.4
654 + 11348 mRNA_2980 0.44 1.0
719 + 11348 mRNA_2980 0.49 1.4
1,007 + 11348 mRNA_2980 0.69 0.6
1,048 - 11348 mRNA_2980 0.72 0.4
1,218 - 11348 mRNA_2980 0.84 -0.5
1,248 + 11348 mRNA_2980 0.86 -0.6
1,364 + 1.1
1,374 - -0.3
1,401 + 0.3
1,452 + 1.4
1,488 - -0.4
1,503 + 1.5
1,513 + -0.3
1,515 - 0.0
1,551 + -0.3
1,634 + 0.4
1,635 + -0.3
1,657 + -0.1
1,668 + -0.1
1,805 - -1.6
1,805 + 0.2
1,818 + 0.3
1,882 + 0.3
1,934 + 0.0
1,948 + -0.4
1,949 - 0.5
1,974 + -0.6
1,992 + 0.2
1,992 + 1.2
1,993 + 0.3
2,011 + 0.2
2,082 + -0.6
2,084 - -0.3
2,086 + 1.0
2,086 + -0.1
2,086 + 1.3
2,095 + -0.4
2,097 - 0.1
2,098 + 0.5
2,115 + -1.2
2,117 + -0.4
2,120 + 0.8
2,121 - 0.2
2,121 - -0.4
2,125 - -0.7
2,126 + -0.3
2,131 + -0.5
2,131 + 0.7
2,131 + 0.2
2,133 + 0.7
2,243 + -0.5
2,265 + -0.5
2,301 + -0.3
2,320 + 0.3
2,324 - -0.4
2,357 + -0.0