Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2979

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2978: 11346 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 699095 to 700907 11346 mRNA_2979: 11347 - Hypothetical Protein, at 700904 to 702212 11347

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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700,062 + 11346 mRNA_2978 0.53 -1.4
700,083 + 11346 mRNA_2978 0.54 0.7
700,299 + 11346 mRNA_2978 0.66 -0.2
700,398 + 11346 mRNA_2978 0.72 -1.9
700,469 - 11346 mRNA_2978 0.76 0.2
700,470 - 11346 mRNA_2978 0.76 0.3
700,470 - 11346 mRNA_2978 0.76 0.1
700,478 - 11346 mRNA_2978 0.76 -1.8
700,581 - 11346 mRNA_2978 0.82 -1.3
700,607 - 11346 mRNA_2978 0.83 0.6
700,611 + 11346 mRNA_2978 0.84 1.7
700,611 + 11346 mRNA_2978 0.84 -1.1
700,619 - 11346 mRNA_2978 0.84 -0.2
700,800 - -1.2
700,827 + 0.4
700,907 + 0.7
700,908 + -0.3
700,922 + -1.9
700,924 - 0.7
701,072 - 11347 mRNA_2979 0.13 0.5
701,222 + 11347 mRNA_2979 0.24 -1.6
701,276 - 11347 mRNA_2979 0.28 0.2
701,406 + 11347 mRNA_2979 0.38 0.5
701,457 - 11347 mRNA_2979 0.42 0.2
701,468 - 11347 mRNA_2979 0.43 0.4
701,468 - 11347 mRNA_2979 0.43 0.6
701,471 - 11347 mRNA_2979 0.43 0.2
701,503 - 11347 mRNA_2979 0.46 -1.1
701,511 - 11347 mRNA_2979 0.46 1.0
701,517 + 11347 mRNA_2979 0.47 -0.2
701,517 - 11347 mRNA_2979 0.47 0.3
701,597 - 11347 mRNA_2979 0.53 0.4
701,602 - 11347 mRNA_2979 0.53 0.2
701,617 + 11347 mRNA_2979 0.54 -1.3
701,656 - 11347 mRNA_2979 0.57 1.0
701,665 - 11347 mRNA_2979 0.58 1.1
701,668 - 11347 mRNA_2979 0.58 -0.3
701,697 - 11347 mRNA_2979 0.61 1.1
701,738 - 11347 mRNA_2979 0.64 -0.9
701,765 - 11347 mRNA_2979 0.66 0.8
701,822 - 11347 mRNA_2979 0.70 0.1
701,823 - 11347 mRNA_2979 0.70 -0.2
701,871 - 11347 mRNA_2979 0.74 -0.5
701,892 + 11347 mRNA_2979 0.75 -0.2
701,906 - 11347 mRNA_2979 0.77 0.5
701,944 + 11347 mRNA_2979 0.79 0.4
701,960 - 11347 mRNA_2979 0.81 0.8
702,028 - 11347 mRNA_2979 0.86 1.3
702,037 - 11347 mRNA_2979 0.87 -0.6
702,059 + 11347 mRNA_2979 0.88 1.4
702,062 + 11347 mRNA_2979 0.88 0.7
702,065 - 11347 mRNA_2979 0.89 -1.1
702,070 - 11347 mRNA_2979 0.89 -1.7
702,090 + 0.5
702,147 - -0.7
702,194 + 0.6
702,218 + 1.1
702,220 - -1.3
702,256 - 0.6
702,256 - -0.6
702,258 - -0.7
702,263 - 1.7
702,263 - 0.1
702,263 - 0.1
702,273 + -0.2
702,276 - -1.4
702,276 - -0.3
702,276 - -0.4
702,276 - -0.2
702,276 - -2.2
702,286 - -0.9
702,290 - 0.6
702,308 - -1.7