Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2880

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2880: 11248 - K10531 pvdA L-ornithine N5-oxygenase, at 436140 to 438445 11248 mRNA_2881: 11249 - KOG0254 Predicted transporter (major facilitator superfamily), at 439393 to 442330 11249

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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435,639 + 0.0
435,681 - 0.1
435,712 + 0.4
435,719 - -0.1
435,735 - 0.6
435,767 + 0.5
435,857 + -1.2
435,875 + 0.1
435,880 + 0.1
435,947 + -0.9
435,948 - -1.3
436,005 - 0.5
436,012 - -0.5
436,014 + -0.2
436,016 + 0.7
436,023 + 0.2
436,040 - 0.1
436,049 - -1.4
436,058 - -0.1
436,058 + -0.3
436,060 + 0.5
436,063 + -0.3
436,084 - 0.2
436,088 + 0.3
436,185 - -0.5
436,215 - -0.3
436,224 - -1.3
436,225 - 0.3
436,248 + 0.1
436,340 - 0.6
436,357 + 0.7
436,390 + 11248 mRNA_2880 0.11 -1.3
436,514 + 11248 mRNA_2880 0.16 0.2
436,540 - 11248 mRNA_2880 0.17 -0.7
436,563 + 11248 mRNA_2880 0.18 0.1
436,576 + 11248 mRNA_2880 0.19 -0.4
436,583 - 11248 mRNA_2880 0.19 -1.1
436,584 + 11248 mRNA_2880 0.19 -0.5
436,611 + 11248 mRNA_2880 0.20 1.0
436,617 - 11248 mRNA_2880 0.21 -0.0
436,674 - 11248 mRNA_2880 0.23 -0.6
436,690 - 11248 mRNA_2880 0.24 -0.6
436,699 + 11248 mRNA_2880 0.24 -2.0
436,706 + 11248 mRNA_2880 0.25 0.8
436,706 - 11248 mRNA_2880 0.25 0.4
436,711 - 11248 mRNA_2880 0.25 0.3
436,799 + 11248 mRNA_2880 0.29 0.4
436,849 - 11248 mRNA_2880 0.31 0.3
437,158 - 11248 mRNA_2880 0.44 -0.9
437,211 + 11248 mRNA_2880 0.46 -0.8
437,289 - 11248 mRNA_2880 0.50 -1.6
437,502 - 11248 mRNA_2880 0.59 0.1
437,510 + 11248 mRNA_2880 0.59 -0.4
437,602 - 11248 mRNA_2880 0.63 0.8
437,952 + 11248 mRNA_2880 0.79 -0.2
437,964 - 11248 mRNA_2880 0.79 0.6
438,115 - 11248 mRNA_2880 0.86 -0.4
438,366 - 0.2
438,379 - -0.4
438,391 - 0.5
438,405 + 1.6
438,415 + 0.0
438,514 + -0.2
438,519 - -0.7
438,667 - -0.8
438,669 + -1.4
438,702 - -0.0
438,785 - 0.2
438,790 + 0.2
438,816 + -0.2
438,932 - -0.6
438,940 - -0.4
438,954 + 0.3
438,966 - 0.8
438,970 + 0.4
438,972 + -0.5
438,972 + -0.8
438,973 - 0.1
438,976 - -1.0
438,977 - 0.0
438,979 - 1.4
439,006 - -0.1
439,006 - 0.5
439,006 - -1.8
439,020 + 0.4
439,020 - -0.1
439,023 + 0.6
439,031 - 0.5
439,038 - -0.8
439,038 - -0.5
439,039 - 0.3
439,039 - -0.8
439,054 + -0.3
439,111 + -0.5
439,121 - 1.0
439,138 - 0.5
439,231 - 0.5
439,233 - -1.2
439,237 + -0.1
439,242 + 0.9
439,243 - -0.1
439,246 - -0.7
439,257 + 0.2
439,275 + -0.3
439,275 - -1.0
439,284 + -0.2
439,296 + -0.5
439,322 - -0.1
439,326 - -0.7
439,330 + 0.0
439,336 + -0.1
439,337 - 1.0
439,353 + 1.0
439,375 - -0.2