Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2794

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2793: 11161 - KOG3834 Golgi reassembly stacking protein GRASP65, contains PDZ domain, at 228041 to 229604 11161 mRNA_2794: 11162 - BLAST protein FAM72A [Rattus norvegicus], at 230035 to 232978 11162 mRNA_2795: 11163 - SUPERFAMILY--SSF56112, at 233342 to 236388 11163

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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229,080 - 11161 mRNA_2793 0.66 1.7
229,253 + 11161 mRNA_2793 0.77 0.7
229,263 + 11161 mRNA_2793 0.78 0.8
229,264 - 11161 mRNA_2793 0.78 -0.3
229,314 - 11161 mRNA_2793 0.81 1.1
229,318 + 11161 mRNA_2793 0.82 -0.9
229,528 - -0.7
229,546 + 1.4
229,553 + 0.7
229,556 + -1.1
229,806 + 0.8
229,838 + 0.3
229,846 + 0.2
229,873 + 0.3
229,958 + 0.2
229,989 - -0.4
229,991 + -0.1
229,991 - 0.3
230,289 - 0.1
230,312 + 0.2
230,595 + 11162 mRNA_2794 0.19 0.1
230,610 - 11162 mRNA_2794 0.20 -1.4
230,615 + 11162 mRNA_2794 0.20 -0.5
230,616 + 11162 mRNA_2794 0.20 0.4
230,616 - 11162 mRNA_2794 0.20 -0.4
230,758 - 11162 mRNA_2794 0.25 -0.3
230,889 - 11162 mRNA_2794 0.29 0.1
230,895 - 11162 mRNA_2794 0.29 -0.7
231,099 + 11162 mRNA_2794 0.36 0.3
231,212 - 11162 mRNA_2794 0.40 0.1
231,212 - 11162 mRNA_2794 0.40 -0.0
231,363 + 11162 mRNA_2794 0.45 -0.8
231,614 - 11162 mRNA_2794 0.54 -0.2
232,039 - 11162 mRNA_2794 0.68 1.4
232,275 - 11162 mRNA_2794 0.76 0.2
232,302 - 11162 mRNA_2794 0.77 -0.9
232,485 + 11162 mRNA_2794 0.83 0.3
232,513 + 11162 mRNA_2794 0.84 0.1
232,545 + 11162 mRNA_2794 0.85 2.1
232,635 + 11162 mRNA_2794 0.88 0.3
232,635 - 11162 mRNA_2794 0.88 0.3
232,637 + 11162 mRNA_2794 0.88 -0.6
232,643 - 11162 mRNA_2794 0.89 0.7
232,668 - 11162 mRNA_2794 0.89 1.6
232,673 - 11162 mRNA_2794 0.90 -0.1
232,673 - 11162 mRNA_2794 0.90 0.0
232,673 - 11162 mRNA_2794 0.90 -0.3
232,674 + 11162 mRNA_2794 0.90 -0.5
232,674 + 11162 mRNA_2794 0.90 0.7
232,674 + 11162 mRNA_2794 0.90 0.2
232,674 + 11162 mRNA_2794 0.90 0.1
232,684 + -1.2
232,738 + 2.1
232,885 - -0.1
232,905 - -0.4
232,935 - -0.3
232,935 - -0.0
232,953 - -1.7
232,958 + -0.3
233,045 - 1.1
233,077 - -0.1
233,080 + 0.1
233,087 + -0.7
233,091 + 1.9
233,113 - -0.2
233,183 + 0.7
233,239 - 1.2
233,379 - 0.7
233,642 - -0.9
233,772 + 11163 mRNA_2795 0.14 0.8