Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2686

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2686: 11054 - Interpro Fungal potassium channel 0, at 510 to 3087 11054 mRNA_2687: 11055 - K16542 CDK5RAP2 CDK5 regulatory subunit-associated protein 2, at 3683 to 8144 11055

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1 + -0.5
28 + -0.4
28 + -1.3
37 + -0.5
37 + -0.7
38 + -0.9
44 + -0.8
48 - -1.2
49 + 1.0
49 + -0.2
49 + 1.4
49 + -1.9
49 + -0.1
49 + 0.4
49 - 0.8
52 + -0.5
54 - 0.3
54 - -0.4
58 + 0.4
62 + -0.7
70 - -0.3
73 + 0.5
74 - 0.3
74 + 0.3
112 - 1.0
120 - -0.0
138 + -0.9
142 + -1.2
142 + -0.2
142 + 0.2
144 + -0.0
145 - 0.3
147 + 0.3
152 + 1.7
159 + -0.0
159 - -0.2
163 + -0.5
169 - -2.6
170 + 0.8
171 - 0.4
173 + -0.2
175 - -0.4
176 + -0.6
177 + -0.4
183 + -1.3
193 + -0.4
205 + -1.1
231 + 0.2
232 + -1.3
235 - -2.9
252 - 0.9
259 + -0.2
259 + 0.2
259 + 0.1
262 - 0.5
269 + -0.8
273 + 0.2
275 - 1.7
289 + 0.8
299 + -0.4
312 - -1.5
339 + -1.7
352 + 1.3
357 + -1.6
358 + -1.2
368 - -1.0
417 - 0.5
429 + 0.9
434 + 0.0
445 + -1.8
462 + -0.9
462 + 0.1
502 + 2.4
529 - 0.3
540 - -0.0
561 + -0.5
584 + -0.3
584 - 0.9
584 + 0.6
633 + -0.2
636 + -1.7
646 + 0.2
703 - -0.8
736 - -0.0
772 - 11054 mRNA_2686 0.10 -1.8
845 - 11054 mRNA_2686 0.13 -0.3
871 + 11054 mRNA_2686 0.14 -0.1
911 + 11054 mRNA_2686 0.16 -0.0
919 - 11054 mRNA_2686 0.16 -1.2
922 + 11054 mRNA_2686 0.16 -0.6
937 - 11054 mRNA_2686 0.17 -0.2
946 - 11054 mRNA_2686 0.17 -1.4
1,039 + 11054 mRNA_2686 0.21 0.2
1,042 - 11054 mRNA_2686 0.21 -0.3
1,056 + 11054 mRNA_2686 0.21 0.9
1,056 + 11054 mRNA_2686 0.21 1.1
1,059 - 11054 mRNA_2686 0.21 -0.4
1,059 - 11054 mRNA_2686 0.21 0.1
1,079 + 11054 mRNA_2686 0.22 0.4
1,089 + 11054 mRNA_2686 0.22 -1.0
1,090 - 11054 mRNA_2686 0.22 -1.1
1,099 - 11054 mRNA_2686 0.23 -0.8
1,116 - 11054 mRNA_2686 0.24 -0.9
1,219 - 11054 mRNA_2686 0.28 2.5
1,230 + 11054 mRNA_2686 0.28 0.3
1,258 - 11054 mRNA_2686 0.29 -1.2
1,270 - 11054 mRNA_2686 0.29 1.5
1,272 + 11054 mRNA_2686 0.30 -0.6
1,324 + 11054 mRNA_2686 0.32 -0.0
1,351 + 11054 mRNA_2686 0.33 0.7
1,464 + 11054 mRNA_2686 0.37 0.8
1,508 + 11054 mRNA_2686 0.39 -0.0
1,514 - 11054 mRNA_2686 0.39 0.4
1,611 + 11054 mRNA_2686 0.43 -0.3
1,642 + 11054 mRNA_2686 0.44 0.1
1,671 + 11054 mRNA_2686 0.45 -2.0
1,680 + 11054 mRNA_2686 0.45 -0.2
1,683 - 11054 mRNA_2686 0.46 -1.5
1,684 + 11054 mRNA_2686 0.46 -0.6
1,699 + 11054 mRNA_2686 0.46 -0.4
1,836 + 11054 mRNA_2686 0.51 0.2
1,912 + 11054 mRNA_2686 0.54 -2.3
1,961 - 11054 mRNA_2686 0.56 -0.5
2,068 - 11054 mRNA_2686 0.60 -0.2
2,071 - 11054 mRNA_2686 0.61 -0.4
2,079 + 11054 mRNA_2686 0.61 -1.4
2,096 - 11054 mRNA_2686 0.62 0.1
2,112 + 11054 mRNA_2686 0.62 -0.1
2,128 + 11054 mRNA_2686 0.63 -1.7
2,140 + 11054 mRNA_2686 0.63 -1.0
2,141 - 11054 mRNA_2686 0.63 1.9
2,158 + 11054 mRNA_2686 0.64 -1.0
2,196 + 11054 mRNA_2686 0.65 -0.1
2,238 + 11054 mRNA_2686 0.67 -1.0
2,250 - 11054 mRNA_2686 0.67 0.3
2,271 + 11054 mRNA_2686 0.68 -0.7
2,404 - 11054 mRNA_2686 0.73 0.1
2,419 + 11054 mRNA_2686 0.74 -0.6
2,442 - 11054 mRNA_2686 0.75 0.7
2,444 - 11054 mRNA_2686 0.75 0.0
2,534 - 11054 mRNA_2686 0.79 -1.6
2,547 - 11054 mRNA_2686 0.79 -0.8
2,564 + 11054 mRNA_2686 0.80 -0.6
2,685 - 11054 mRNA_2686 0.84 0.1
2,806 + 11054 mRNA_2686 0.89 -0.5
2,806 - 11054 mRNA_2686 0.89 -0.8
2,814 - 11054 mRNA_2686 0.89 -1.5
2,938 + 0.6
2,971 + -0.5
2,984 - 0.1
3,056 - 0.0
3,090 + -0.3
3,127 + -0.9
3,135 - 1.4
3,141 + 0.1
3,282 + -1.1
3,380 + -0.9
3,409 - 0.1