Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2671

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2670: 11038 - SUPERFAMILY--SSF52058, at 724183 to 725340 11038 mRNA_2671: 11039 - K00111 glpA, glpD glycerol-3-phosphate dehydrogenase, at 726293 to 729723 11039 mRNA_2672: 11040 - K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17, at 730581 to 733538 11040

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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725,372 + -0.3
725,398 + -0.2
725,400 + -0.6
725,457 - 0.1
725,590 + -0.4
725,602 + 0.5
725,745 - 0.3
725,753 + -0.4
725,765 - 0.0
725,773 + 1.8
725,774 - -0.7
725,783 + 1.1
725,800 + -0.5
725,807 + -0.6
725,814 - 0.6
725,843 - 0.3
725,879 + 1.0
725,879 + -0.3
726,006 + -0.3
726,029 + 1.2
726,045 + 0.4
726,203 + 1.1
726,748 - 11039 mRNA_2671 0.13 0.7
727,041 + 11039 mRNA_2671 0.22 1.4
727,099 + 11039 mRNA_2671 0.23 -0.7
727,186 - 11039 mRNA_2671 0.26 -0.0
727,484 + 11039 mRNA_2671 0.35 -0.0
727,816 - 11039 mRNA_2671 0.44 -0.4
727,933 + 11039 mRNA_2671 0.48 -1.1
728,039 - 11039 mRNA_2671 0.51 1.1
728,053 - 11039 mRNA_2671 0.51 1.1
728,078 + 11039 mRNA_2671 0.52 -0.8
728,416 + 11039 mRNA_2671 0.62 -0.2
728,511 - 11039 mRNA_2671 0.65 0.5
728,802 - 11039 mRNA_2671 0.73 -1.5
729,527 + -0.7
729,665 + 0.5
729,703 + -0.4
729,785 - 0.1
729,799 + 0.3
729,956 - 0.0
729,959 - -0.9
729,968 - -0.7
729,969 + 0.3
729,970 + -0.4
729,999 - 1.6
730,001 - -0.9
730,013 + -0.3
730,013 + -0.1
730,087 - 0.4
730,112 - 0.3
730,119 + 1.2
730,122 - 0.3
730,144 - 0.5
730,146 - 0.3
730,146 - -1.6
730,147 + 0.3
730,152 - 0.2
730,152 + 0.6
730,167 + -1.7
730,172 - 0.4
730,185 + 0.1
730,213 + 0.3
730,213 + 0.3
730,287 + 0.7
730,300 + -0.5
730,309 + -0.1
730,323 + 0.4
730,330 - 1.0
730,340 + -0.2
730,470 - -1.4
730,472 - 0.6
730,473 - 0.8
730,476 - 0.5
730,484 - 0.5
730,497 + 1.0
730,504 + -3.2
730,505 + -0.3
730,507 - -0.0
730,618 - 1.0