Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2449

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2448: 10816 - Hypothetical Protein, at 157035 to 159573 10816 mRNA_2449: 10817 - KOG1343 Histone deacetylase complex, catalytic component HDA1, at 159950 to 161445 10817 mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161540 to 163035 10818

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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158,977 - 10816 mRNA_2448 0.76 1.6
159,086 + 10816 mRNA_2448 0.81 -0.8
159,394 - 0.1
159,424 + 0.2
159,433 - 0.8
159,522 - 0.7
159,543 - -0.8
159,643 - -0.5
159,831 + 0.4
159,851 + -1.4
159,980 - -0.3
160,001 - 0.6
160,009 - 0.6
160,272 - 10817 mRNA_2449 0.22 -0.1
160,425 - 10817 mRNA_2449 0.32 -0.2
161,173 + 10817 mRNA_2449 0.82 0.2
161,281 - 10817 mRNA_2449 0.89 0.7
161,434 + -0.3
161,465 + 0.7
161,905 + 10818 mRNA_2450 0.24 -1.0
162,014 + 10818 mRNA_2450 0.32 0.9
162,272 + 10818 mRNA_2450 0.49 -0.0
162,291 - 10818 mRNA_2450 0.50 0.1