Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2322

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2321: 10689 - K14807 DDX51, DBP6 ATP-dependent RNA helicase DDX51/DBP6, at 604206 to 606574 10689 mRNA_2322: 10690 - Hypothetical Protein, at 606743 to 609720 10690

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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606,669 + -0.9
607,269 + 10690 mRNA_2322 0.18 0.4
607,390 - 10690 mRNA_2322 0.22 0.1
607,497 - 10690 mRNA_2322 0.25 -0.1
607,957 - 10690 mRNA_2322 0.41 -0.4
607,978 + 10690 mRNA_2322 0.41 0.5
608,215 - 10690 mRNA_2322 0.49 0.0
608,541 + 10690 mRNA_2322 0.60 0.8
608,600 - 10690 mRNA_2322 0.62 0.1
608,660 - 10690 mRNA_2322 0.64 -0.1
608,685 - 10690 mRNA_2322 0.65 -1.2
608,997 - 10690 mRNA_2322 0.76 -0.1
609,180 - 10690 mRNA_2322 0.82 -0.0
609,309 - 10690 mRNA_2322 0.86 -0.3
609,315 + 10690 mRNA_2322 0.86 -0.2
609,603 - -0.6
609,651 - -1.4
609,729 - 0.2
609,750 + -0.2
609,763 + 0.1
609,763 + 0.2
609,770 + -2.5
609,860 - 0.4
609,874 - -0.8
609,890 - -0.2
609,897 - -0.1
609,899 + 0.0
609,916 + 0.7
609,918 + 1.0
610,012 + -0.8
610,026 + -1.4
610,036 - 1.1
610,042 - 0.8
610,043 + 0.6
610,045 - -0.5
610,045 - -0.7
610,046 + 0.7
610,075 + -0.6
610,087 + -0.3
610,087 - 0.8
610,091 + -1.1
610,095 + 0.5
610,096 + -0.6
610,097 - 0.6
610,100 + -1.6
610,103 - -1.4
610,104 - -0.7
610,106 - 0.3
610,107 + -0.1
610,111 - -0.1
610,114 + 0.3
610,114 - -0.0
610,117 - 0.8
610,120 + -1.8
610,120 - 1.4
610,122 + -0.6
610,126 + -0.4
610,129 - 0.8
610,129 + -1.0
610,129 + -0.4
610,129 + 0.1
610,135 + 0.5
610,141 - -0.8
610,144 + 0.3
610,146 + -2.0
610,149 + -0.1
610,149 + -0.2
610,153 + 0.2
610,154 - 0.7
610,169 - 0.4
610,181 - 0.3
610,182 - -0.3
610,185 - 0.6
610,187 - -1.0
610,188 - 0.4
610,190 - -1.5
610,190 - -0.6
610,194 - -0.8
610,194 + -0.6
610,208 - 0.2
610,216 + 0.1
610,245 - 0.0
610,257 + 1.1
610,301 - -0.6
610,311 + 0.8
610,315 - 0.9
610,323 - -0.3
610,356 + -0.9
610,365 - -0.6
610,385 - 0.6
610,415 - 0.2
610,439 - 1.3
610,460 - -1.3
610,466 - 1.4
610,467 - 0.4
610,477 - 0.1
610,477 - 0.0
610,489 + 0.6
610,506 + 0.2
610,518 - -0.1
610,537 - 0.3
610,558 - -0.2
610,589 - 0.4
610,606 + 0.4
610,610 - 0.1
610,650 + 0.5