Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2190

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2190: 10558 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 301262 to 303174 10558 mRNA_2191: 10559 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048, at 304016 to 306697 10559

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
300,332 + 0.6
300,339 - 0.6
300,352 + 0.2
300,356 + 0.0
300,359 - -0.5
300,397 + -1.5
300,503 - 0.3
300,506 - 0.3
300,543 - 0.6
300,619 - -0.3
300,674 + 0.6
300,680 + -0.2
300,688 + -0.7
300,690 + 0.6
300,840 + 0.7
300,963 - -0.2
300,978 - -1.6
300,978 - 1.0
300,979 - -0.8
300,989 + -0.1
300,991 + 0.9
301,144 + -0.3
301,145 - -0.2
301,151 - 0.3
301,155 + -0.3
301,162 - -0.9
301,164 + 0.1
301,168 + 0.2
301,169 + 0.2
301,170 + 1.6
301,177 + 1.0
301,188 - 0.2
301,316 - 1.4
301,316 - -1.4
301,375 + -0.1
301,419 - -3.2
301,476 - 10558 mRNA_2190 0.11 0.8
302,065 + 10558 mRNA_2190 0.42 1.2
302,172 - 10558 mRNA_2190 0.48 0.1
302,343 + 10558 mRNA_2190 0.57 -0.7
302,345 - 10558 mRNA_2190 0.57 -0.2
302,651 - 10558 mRNA_2190 0.73 -0.2
302,688 + 10558 mRNA_2190 0.75 0.5
302,739 + 10558 mRNA_2190 0.77 0.6
302,799 - 10558 mRNA_2190 0.80 -1.8
302,800 + 10558 mRNA_2190 0.80 -1.0
302,850 + 10558 mRNA_2190 0.83 -0.0
302,879 - 10558 mRNA_2190 0.85 1.0
303,371 - 0.9
303,387 + -0.0
303,532 - -0.7
303,691 - 1.2
303,692 - -0.2
303,822 + 0.1
303,955 - 1.8
304,101 + 0.0