Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2135

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2134: 10502 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 148859 to 150709 10502 mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150841 to 152742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153030 to 154707 10504

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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149,911 + 10502 mRNA_2134 0.57 -1.7
149,913 - 10502 mRNA_2134 0.57 -1.7
150,277 - 10502 mRNA_2134 0.77 0.3
150,622 + 0.3
150,623 + 0.8
150,712 + -0.2
150,725 + -1.1
150,752 + -0.6
150,774 + 0.1
150,861 - -0.2
150,896 - 1.1
150,941 + 0.8
151,043 - 10503 mRNA_2135 0.11 -0.4
151,062 - 10503 mRNA_2135 0.12 -1.0
151,089 + 10503 mRNA_2135 0.13 1.2
151,197 + 10503 mRNA_2135 0.19 0.3
151,216 + 10503 mRNA_2135 0.20 -0.1
151,245 - 10503 mRNA_2135 0.21 -1.5
151,478 - 10503 mRNA_2135 0.33 -0.1
151,776 + 10503 mRNA_2135 0.49 0.8
151,785 - 10503 mRNA_2135 0.50 0.1
151,881 + 10503 mRNA_2135 0.55 0.9
151,979 - 10503 mRNA_2135 0.60 0.9
152,197 + 10503 mRNA_2135 0.71 -0.3
152,238 - 10503 mRNA_2135 0.73 0.8
152,282 + 10503 mRNA_2135 0.76 -0.6
152,360 - 10503 mRNA_2135 0.80 -0.7
152,650 + 0.8
152,654 - 1.3
152,664 - 1.0
152,690 - 0.4
152,693 + 0.8
152,700 + 0.5
152,764 + -0.2
152,808 - 0.1
153,117 - -0.5
153,269 + 10504 mRNA_2136 0.14 -0.0
153,307 - 10504 mRNA_2136 0.17 0.4
153,666 - 10504 mRNA_2136 0.38 -0.9
153,673 - 10504 mRNA_2136 0.38 -0.6
153,721 - 10504 mRNA_2136 0.41 -0.1