Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1836

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1836: 10204 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729, at 329163 to 331495 10204 mRNA_1837: 10205 - K00281 GLDC, gcvP glycine dehydrogenase, at 331991 to 335971 10205

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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328,228 - 0.2
328,263 + -1.5
328,654 - 0.6
328,665 - -1.3
328,677 + 0.0
328,679 + -0.3
328,819 - -1.6
328,823 - -0.4
328,824 - -0.3
328,828 + -1.1
328,842 + 0.1
328,846 - 0.0
328,877 - 0.1
328,891 + -0.2
328,971 - -0.1
328,991 - -0.6
328,991 + 0.8
328,994 + -1.4
329,007 + 0.9
329,009 - -0.4
329,013 + 0.4
329,022 + 0.3
329,022 - -0.3
329,023 - 0.0
329,030 + 0.1
329,072 + -0.2
329,072 - -0.6
329,077 + -1.1
329,078 - 0.5
329,080 - -1.3
329,090 - 0.3
329,094 - 0.2
329,097 + 0.7
329,110 + -1.2
329,111 - 0.6
329,114 + 0.1
329,127 + 0.4
329,136 + 0.6
329,259 - -1.0
329,269 + 0.6
329,392 + -0.1
329,519 + 10204 mRNA_1836 0.15 -0.1
329,542 + 10204 mRNA_1836 0.16 -2.4
329,544 - 10204 mRNA_1836 0.16 -0.1
329,872 + 10204 mRNA_1836 0.30 0.3
330,250 + 10204 mRNA_1836 0.47 0.3
330,334 - 10204 mRNA_1836 0.50 1.2
330,629 + 10204 mRNA_1836 0.63 1.4
330,698 - 10204 mRNA_1836 0.66 -2.8
330,902 - 10204 mRNA_1836 0.75 0.4
331,610 + 0.1
331,748 - -0.7
331,855 + -1.2
331,862 - 1.2
331,868 - 0.1
331,878 + 0.4
331,903 + -0.0
331,988 - -1.2
332,007 - -0.2
332,013 - -0.3
332,014 - -0.9
332,014 + -0.9
332,014 + 0.2
332,014 - -0.3
332,015 + 0.4
332,039 + -0.2
332,055 + 0.8
332,174 - -1.6
332,315 + 0.5
332,343 + 0.1
332,475 - 10205 mRNA_1837 0.12 1.9