Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1812

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1811: 10179 - HMMPfam-Centrosome microtubule-binding domain of Cep57-PF06657, at 261573 to 264889 10179 mRNA_1812: 10180 - Hypothetical Protein, at 265152 to 268202 10180 mRNA_1813: 10181 - K04352 RASA1, RASGAP Ras GTPase-activating protein 1, at 269173 to 274604 10181

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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264,832 - -1.2
264,878 + 0.3
265,020 - -0.2
265,146 + 0.1
265,865 - 10180 mRNA_1812 0.23 0.3
265,872 + 10180 mRNA_1812 0.24 -0.1
266,040 - 10180 mRNA_1812 0.29 -0.5
266,043 + 10180 mRNA_1812 0.29 0.3
266,632 - 10180 mRNA_1812 0.49 -1.2
266,753 - 10180 mRNA_1812 0.52 0.0
267,262 - 10180 mRNA_1812 0.69 0.4
267,670 - 10180 mRNA_1812 0.83 0.1
267,671 + 10180 mRNA_1812 0.83 0.6
267,819 - 10180 mRNA_1812 0.87 1.3
267,996 - 0.8
268,120 + 0.1
268,134 - -0.1
268,140 + -1.2
268,225 - 0.6
268,262 - 0.7
268,263 - 0.6
268,263 - 0.2
268,263 - 0.1
268,272 - 0.7
268,304 + 0.5
268,341 - -0.2
268,343 + -0.2
268,353 - 0.4
268,358 - -0.6
268,359 - 0.4
268,359 + 0.5
268,384 - 0.6
268,388 + 0.4
268,389 - -0.8
268,391 + 0.8
268,391 - 0.1
268,393 - 0.5
268,397 - -1.7
268,398 - 0.7
268,413 + 0.8
268,419 + 0.8
268,425 - 0.0
268,434 + 0.5
268,439 - -0.2
268,441 - 0.4
268,447 - -0.2
268,447 - 0.9
268,449 - -0.2
268,454 - 0.3
268,469 - -0.1
268,471 + 0.6
268,482 - -0.1
268,484 - 0.3
268,514 + 0.4
268,540 - 0.1
268,540 + -0.5
268,553 - -0.4
268,572 + -1.1
268,575 + -0.8
268,577 - 0.2
268,577 + -0.1
268,656 + -1.5
268,680 + 1.6
268,682 - -0.2
268,690 - -0.3
268,700 + -0.4
268,718 - 0.9
268,737 - -0.2
268,831 - 0.1
268,867 - 0.7
268,888 - 1.1
268,988 - 0.2
268,991 + 0.3
269,002 - -0.3
269,005 + -0.0
269,005 + -1.6
269,026 + -0.0
269,135 - 0.3
269,141 + 0.1