Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1773

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1772: 10140 - K01480 speB agmatinase, at 169490 to 170600 10140 mRNA_1773: 10141 - Hypothetical Protein, at 171350 to 172928 10141 mRNA_1774: 10142 - Hypothetical Protein, at 173181 to 173906 10142

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
170,357 - 10140 mRNA_1772 0.78 0.9
170,361 - 10140 mRNA_1772 0.78 -0.6
170,521 - 0.2
170,664 - -0.3
170,686 + 0.2
170,820 + -0.8
170,824 + -1.8
170,827 - 1.6
170,837 - 0.6
170,847 - 0.0
170,971 - 0.2
171,115 + 0.1
171,231 - 1.1
171,239 + -0.8
171,240 - 0.3
171,280 + -0.5
171,414 - 0.2
171,608 - 10141 mRNA_1773 0.16 0.8
171,609 + 10141 mRNA_1773 0.16 -0.6
171,612 - 10141 mRNA_1773 0.17 -1.0
171,853 + 10141 mRNA_1773 0.32 -0.2
171,884 + 10141 mRNA_1773 0.34 0.6
172,015 + 10141 mRNA_1773 0.42 0.0
172,155 + 10141 mRNA_1773 0.51 1.7
172,161 + 10141 mRNA_1773 0.51 -0.1
172,295 + 10141 mRNA_1773 0.60 0.5
172,304 - 10141 mRNA_1773 0.60 0.2
172,430 + 10141 mRNA_1773 0.68 0.9
172,798 + -0.9
172,878 - -0.9
172,916 - -0.2
172,933 + -0.6
173,158 - -0.2
173,224 + 0.5
173,309 - 10142 mRNA_1774 0.18 -0.4
173,366 + 10142 mRNA_1774 0.25 0.5
173,398 + 10142 mRNA_1774 0.30 -0.3
173,504 + 10142 mRNA_1774 0.44 -0.6
173,512 + 10142 mRNA_1774 0.46 -0.2
173,596 + 10142 mRNA_1774 0.57 -0.2
173,634 + 10142 mRNA_1774 0.62 0.1
173,650 + 10142 mRNA_1774 0.65 0.6
173,899 - -0.4