Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1755

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1754: 10122 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 121684 to 123500 10122 mRNA_1755: 10123 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 123629 to 124708 10123 mRNA_1756: 10124 - KOG2821 RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin A, at 124866 to 126194 10124

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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122,859 - 10122 mRNA_1754 0.65 1.3
122,878 + 10122 mRNA_1754 0.66 -0.4
122,914 - 10122 mRNA_1754 0.68 1.1
123,206 - 10122 mRNA_1754 0.84 0.7
123,219 + 10122 mRNA_1754 0.84 -0.2
123,328 + 0.8
123,467 + 0.2
123,470 - -0.1
123,767 - 10123 mRNA_1755 0.13 0.9
123,924 + 10123 mRNA_1755 0.27 1.8
123,926 + 10123 mRNA_1755 0.28 1.4
123,934 - 10123 mRNA_1755 0.28 1.9
123,942 + 10123 mRNA_1755 0.29 1.6
124,349 - 10123 mRNA_1755 0.67 1.1
124,497 + 10123 mRNA_1755 0.80 0.9
124,501 - 10123 mRNA_1755 0.81 1.3
124,634 - 0.9
124,640 - 1.9
124,781 - -0.4
124,798 - 1.2
124,813 - 1.1
124,818 - 1.4
124,853 - 1.3
124,960 - -0.3
125,073 - 10124 mRNA_1756 0.16 0.2
125,075 - 10124 mRNA_1756 0.16 0.9
125,373 - 10124 mRNA_1756 0.38 -0.8
125,397 - 10124 mRNA_1756 0.40 1.1
125,429 - 10124 mRNA_1756 0.42 -0.6
125,539 - 10124 mRNA_1756 0.51 1.0
125,562 - 10124 mRNA_1756 0.52 0.3
125,567 + 10124 mRNA_1756 0.53 0.6