Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1566

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1565: 9933 - KOG1860 Nuclear protein export factor, at 604614 to 609512 9933 mRNA_1566: 9934 - Hypothetical Protein, at 610347 to 612663 9934 mRNA_1567: 9935 - KOG4129 Exopolyphosphatases and related proteins, at 612854 to 615039 9935

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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609,600 + -1.5
609,605 - -0.5
609,606 - -1.1
609,611 + -0.3
609,612 + -0.4
609,613 - 0.1
609,619 - -0.4
609,770 - -0.2
609,782 + -1.6
609,788 - -0.4
609,806 - -0.4
609,907 - 0.3
609,918 + 0.0
609,936 - -0.5
609,946 + 0.8
609,948 + -1.1
609,968 + -0.1
610,067 + 0.4
610,069 - -0.0
610,075 - 0.1
610,083 + 0.5
610,227 + -0.3
610,264 + 0.2
610,265 + 0.9
610,375 - -0.7
610,376 + 0.8
610,531 + 0.5
611,366 - 9934 mRNA_1566 0.44 -0.7
611,396 + 9934 mRNA_1566 0.45 0.3
611,398 - 9934 mRNA_1566 0.45 0.0
611,408 + 9934 mRNA_1566 0.46 -1.5
611,644 + 9934 mRNA_1566 0.56 -0.8
612,380 + 9934 mRNA_1566 0.88 -1.9
612,560 + -0.3
612,707 + -1.6
612,753 - -1.0
613,277 - 9935 mRNA_1567 0.19 -0.3
613,301 - 9935 mRNA_1567 0.20 -0.4