Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1444

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1444: 9812 - KOG4173 Alpha-SNAP protein, at 294219 to 295156 9812 mRNA_1445: 9813 - K20045 ITSN intersectin, at 295295 to 301799 9813

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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293,270 + 0.8
293,273 - 0.0
293,279 - -0.9
293,282 - 0.1
293,289 - 0.6
293,289 - 0.9
293,289 - 0.2
293,292 + 0.1
293,293 + -1.7
293,307 + 1.5
293,315 - 0.1
293,316 + -0.5
293,321 + 0.2
293,324 + -0.1
293,326 - -1.7
293,450 - -0.5
293,704 - -0.8
294,007 + 0.3
294,008 - 0.4
294,019 + 0.1
294,163 - -0.6
294,174 + -0.1
294,183 + -0.5
294,204 + 0.2
294,320 - 9812 mRNA_1444 0.11 0.6
294,323 - 9812 mRNA_1444 0.11 -0.0
294,485 + 9812 mRNA_1444 0.28 -0.5
294,601 - 9812 mRNA_1444 0.41 1.3
294,743 - 9812 mRNA_1444 0.56 1.2
294,744 - 9812 mRNA_1444 0.56 -1.0
294,907 - 9812 mRNA_1444 0.73 -0.2
295,199 - -0.5
295,613 - -0.3
295,619 - -0.7
295,909 - -0.2
295,931 - -0.3
295,948 - 9813 mRNA_1445 0.10 0.3
295,948 - 9813 mRNA_1445 0.10 -1.0