Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1376

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1375: 9743 - K08139 HXT MFS transporter, SP family, sugar-H+ symporter, at 123978 to 126769 9743 mRNA_1376: 9744 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SUPERFAMILY--SSF47459, at 127099 to 128886 9744 mRNA_1377: 9745 - Hypothetical Protein, at 129264 to 129958 9745

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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126,483 + 9743 mRNA_1375 0.90 0.1
126,493 + 0.5
126,605 - -0.1
126,623 + 0.1
126,915 - 1.0
127,262 - -0.0
127,337 + 9744 mRNA_1376 0.13 -1.5
127,528 + 9744 mRNA_1376 0.24 -1.0
127,765 + 9744 mRNA_1376 0.37 -2.5
127,806 - 9744 mRNA_1376 0.40 -2.2
127,816 - 9744 mRNA_1376 0.40 -1.7
128,043 - 9744 mRNA_1376 0.53 0.3
128,354 + 9744 mRNA_1376 0.70 0.0
128,510 - 9744 mRNA_1376 0.79 -1.1
128,804 - -0.7
128,965 + -0.5
129,101 + 0.3
129,109 - -0.7
129,110 + 0.0
129,118 + 1.4
129,119 - 0.7
129,127 + 0.3
129,135 + -0.1
129,160 + -0.4
129,394 + 9745 mRNA_1377 0.19 0.1
129,578 + 9745 mRNA_1377 0.45 1.3
129,667 - 9745 mRNA_1377 0.58 -1.1
129,680 + 9745 mRNA_1377 0.60 0.3
129,690 + 9745 mRNA_1377 0.61 0.8
129,841 - 9745 mRNA_1377 0.83 -1.4
129,858 - 9745 mRNA_1377 0.85 -1.1