Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1360

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1359: 9727 - K06018 PPN1 endopolyphosphatase, at 85771 to 88302 9727 mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728 mRNA_1361: 9729 - Hypothetical Protein, at 90771 to 91579 9729

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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87,713 - 9727 mRNA_1359 0.77 0.2
87,736 + 9727 mRNA_1359 0.78 -0.7
87,769 + 9727 mRNA_1359 0.79 -1.4
88,292 + -1.8
88,298 - -3.0
88,415 - 0.6
88,416 + 1.3
88,434 - -1.9
88,457 - 0.7
88,468 + -0.3
88,568 - -0.6
88,576 - -0.1
88,585 - -0.8
88,603 + -0.7
88,604 - -0.1
88,727 + -0.7
88,736 - 0.5
89,033 - 9728 mRNA_1360 0.27 -0.8
89,050 - 9728 mRNA_1360 0.28 -1.9
89,355 + 9728 mRNA_1360 0.48 -1.2
89,532 + 9728 mRNA_1360 0.59 0.0
89,685 + 9728 mRNA_1360 0.69 -0.7
89,697 - 9728 mRNA_1360 0.70 -0.1
89,965 + 9728 mRNA_1360 0.87 -0.6
90,038 + -0.7
90,068 + -0.3
90,145 - -1.1
90,242 - -0.0
90,326 - 1.0
90,328 + 0.6
90,335 - 0.2
90,349 + -2.1
90,350 + 0.2
90,356 + 0.6
90,364 + -0.1
90,374 + -0.1
90,376 - -1.4
90,378 - -0.1
90,532 - -0.0
90,534 - -0.3
90,556 + 0.4
90,568 + -0.6
90,606 - -0.2
90,696 + 0.2
90,709 + -1.4
90,822 - 0.3
90,901 - 9729 mRNA_1361 0.16 -1.1
91,118 - 9729 mRNA_1361 0.43 1.7
91,123 - 9729 mRNA_1361 0.44 -0.2