Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1326

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1696 9694 mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1 + -0.3
25 + 0.4
49 - 1.1
50 + 2.3
53 + -0.4
57 - -0.4
57 + 0.8
58 - -0.3
62 + 0.2
62 - 1.6
76 + 1.2
109 + -0.4
122 + -1.7
125 - 0.2
126 + -0.3
128 - -0.4
134 + -0.1
143 + 1.5
144 + 0.1
148 + 0.7
176 - 0.7
186 + 0.3
199 + -0.4
240 + -1.2
240 + -0.4
250 + 0.7
250 + 0.4
256 - -2.7
279 + -1.1
282 + -0.7
286 - -2.8
290 + -1.2
542 - 9694 mRNA_1326 0.21 -0.3
545 + 9694 mRNA_1326 0.22 0.9
726 - 9694 mRNA_1326 0.34 -2.8
1,007 + 9694 mRNA_1326 0.53 -1.1
1,016 - 9694 mRNA_1326 0.54 -1.6
1,322 - 9694 mRNA_1326 0.74 -2.1
1,417 - 9694 mRNA_1326 0.81 -0.2
1,888 - 0.5
1,889 - -1.2
2,000 + -1.3
2,009 + -2.1
2,141 - -0.1
2,152 - 0.5
2,166 + -0.6
2,167 + -0.2
2,173 + 0.6
2,180 - 1.8
2,180 + -0.5
2,189 + -0.4
2,189 + -0.2
2,197 + -0.3
2,246 + -0.1
2,333 - -2.5
2,471 + -0.9
2,490 + 0.1