Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1285

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1284: 9652 - K12897 TRA2 transformer-2 protein, at 832225 to 833165 9652 mRNA_1285: 9653 - Interpro Ribosomal protein 60S L18 and 50S L18e 0, at 833879 to 834376 9653 mRNA_1286: 9654 - HMMPfam-short chain dehydrogenase-PF00106,SUPERFAMILY--SSF51735, at 834621 to 836012 9654

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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833,218 + -0.6
833,511 + -1.4
833,771 + 2.6
833,803 - 0.1
833,936 - 9653 mRNA_1285 0.11 0.3
833,994 - 9653 mRNA_1285 0.23 -0.6
834,255 + 9653 mRNA_1285 0.76 2.1
834,635 - -0.3
834,672 - -0.1
834,682 + -0.2
834,838 + 9654 mRNA_1286 0.16 0.9
834,981 + 9654 mRNA_1286 0.26 -0.8
834,986 - 9654 mRNA_1286 0.26 -1.3
835,095 - 9654 mRNA_1286 0.34 -1.6