Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1279

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830 9646 mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265 9647

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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821,706 - -0.3
821,717 - 0.0
821,730 + 0.1
821,744 + 0.4
821,748 + 0.3
821,752 - -0.0
821,755 + -0.0
821,764 + 0.2
821,835 + -0.0
821,887 + -0.9
821,911 + -0.6
821,919 + 0.0
821,919 + -0.6
821,921 + 0.1
821,922 - 1.7
821,923 - -0.1
821,923 + 0.1
821,924 + -0.3
821,927 + 0.6
821,928 + 0.0
821,929 - -0.1
821,931 + -0.0
821,939 - 0.2
821,940 - -1.3
821,941 - -0.0
821,941 + 0.7
821,965 + -0.5
821,970 - 0.6
821,975 - 0.2
821,983 - 0.2
821,996 - 0.3
822,000 - 0.8
822,004 - 2.0
822,005 - 0.7
822,091 - -0.5
822,179 - 0.5
822,180 + 0.1
822,189 - -0.1
822,208 - 0.6
822,214 - -0.8
822,214 - -0.5
822,231 - 0.4
822,235 - -0.6
822,242 + -0.9
822,242 + 0.8
822,249 + -0.4
822,250 + -0.3
822,257 - 0.2
822,259 + -0.8
822,262 + -0.4
822,266 - -1.7
822,375 + -0.2
822,377 + 1.1
823,107 - 9647 mRNA_1279 0.29 0.6
823,108 + 9647 mRNA_1279 0.29 0.2
823,119 + 9647 mRNA_1279 0.30 -0.1
823,440 - 9647 mRNA_1279 0.50 -0.3
823,448 + 9647 mRNA_1279 0.50 -0.2
823,697 - 9647 mRNA_1279 0.65 -1.1
823,735 + 9647 mRNA_1279 0.68 0.3
824,015 + 9647 mRNA_1279 0.85 -1.4
824,386 - 0.2
824,792 - 0.4
824,796 + 0.5
824,800 + 0.0
824,821 + -0.5
824,821 + -1.5
824,866 + -0.2
824,874 - -0.2
824,874 + 1.5
824,894 + -1.3
825,013 + 0.3
825,046 - -0.5
825,053 + 0.0
825,054 - -0.3
825,095 - -1.4
825,116 - -0.6
825,141 + -1.1
825,141 + 0.8
825,178 - -0.5
825,184 - -0.3
825,190 + -1.8
825,191 - -2.7
825,193 - 0.6
825,198 + 0.1
825,200 - -1.3
825,206 + 0.4
825,211 + 0.4
825,211 + -1.5
825,224 - 0.9
825,241 - -0.2
825,243 + -0.1
825,244 - 0.2
825,245 - 0.8