Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1277

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1276: 9644 - K01070 frmB, ESD, fghA S-formylglutathione hydrolase, at 815898 to 817599 9644 mRNA_1277: 9645 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 817751 to 818897 9645 mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830 9646

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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816,874 + 9644 mRNA_1276 0.57 -1.5
816,875 - 9644 mRNA_1276 0.57 -1.0
817,059 + 9644 mRNA_1276 0.68 -0.3
817,420 + 9644 mRNA_1276 0.89 -0.4
817,493 + -2.1
817,794 - -0.1
818,402 + 9645 mRNA_1277 0.57 -1.0
818,512 + 9645 mRNA_1277 0.66 -0.8
818,527 - 9645 mRNA_1277 0.68 -0.4
818,533 + 9645 mRNA_1277 0.68 -1.1
818,536 + 9645 mRNA_1277 0.68 -2.9
818,789 - 1.5
818,940 + -0.6
818,998 - -0.3
819,004 + -0.9
819,103 + 0.2
819,180 + -0.3
819,274 - -0.2
819,447 - 0.5
819,829 - 9646 mRNA_1278 0.14 1.5
819,837 + 9646 mRNA_1278 0.14 -1.2