Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1217

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1216: 9584 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 669963 to 671497 9584 mRNA_1217: 9585 - K10580 UBE2N, BLU, UBC13 ubiquitin-conjugating enzyme E2 N, at 672006 to 672875 9585 mRNA_1218: 9586 - SUPERFAMILY--SSF52047, at 673379 to 675043 9586

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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671,072 - 9584 mRNA_1216 0.72 -0.9
671,466 - 0.3
672,064 - 0.8
672,149 - 9585 mRNA_1217 0.16 -1.5
672,446 + 9585 mRNA_1217 0.51 -1.8
672,625 + 9585 mRNA_1217 0.71 -2.2
672,649 - 9585 mRNA_1217 0.74 -0.2
672,749 + 9585 mRNA_1217 0.85 -0.7
672,755 + 9585 mRNA_1217 0.86 -2.3
673,063 - 0.1
673,063 + -0.2
673,080 - -0.6
673,233 + 0.2
673,235 + -0.3
673,268 - -1.2
673,404 - -0.0
673,462 + -0.4
673,875 - 9586 mRNA_1218 0.30 -0.4