Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1196

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1195: 9563 - K03248 EIF3G translation initiation factor 3 subunit G, at 624077 to 625434 9563 mRNA_1196: 9564 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 626227 to 627477 9564

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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625,859 + 0.1
625,874 - -1.4
625,994 + -0.9
626,006 - -0.1
626,007 - 0.0
626,008 + -0.6
626,015 + 0.6
626,042 + 0.0
626,135 - -0.8
626,246 + 0.1
626,299 - -0.2
626,427 + 9564 mRNA_1196 0.16 -3.2
626,707 - 9564 mRNA_1196 0.38 -0.9
626,729 + 9564 mRNA_1196 0.40 -1.2
626,876 + 9564 mRNA_1196 0.52 -0.6
627,005 + 9564 mRNA_1196 0.62 -0.7
627,254 + 9564 mRNA_1196 0.82 0.6
627,453 - -1.5
627,786 - -0.1
627,872 + 0.4
627,987 + -0.3
628,004 + -0.2
628,200 + -0.1
628,266 + -1.5
628,314 - -1.2
628,325 - 0.8
628,326 + 0.6
628,328 - -0.8
628,332 - -0.4
628,344 - 0.2
628,432 - -0.1
628,448 - -0.5