Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1193

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1192: 9560 - KOG2504 Monocarboxylate transporter, at 616392 to 618414 9560 mRNA_1193: 9561 - KOG2504 Monocarboxylate transporter, at 618729 to 620711 9561 mRNA_1194: 9562 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 621153 to 623607 9562

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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617,921 - 9560 mRNA_1192 0.76 -1.0
617,953 + 9560 mRNA_1192 0.77 -0.7
618,052 + 9560 mRNA_1192 0.82 -0.4
618,052 - 9560 mRNA_1192 0.82 0.7
618,192 - 9560 mRNA_1192 0.89 0.1
618,229 - -0.8
618,229 + 0.1
618,244 + -0.7
618,371 + -0.1
618,381 + 0.4
618,405 + 0.8
618,416 - 0.1
618,417 + -0.9
618,418 + -0.3
618,418 + 0.5
618,418 + -0.8
618,418 + 0.5
618,418 + 1.0
618,419 + -0.2
618,419 + -0.3
618,425 + 1.6
618,530 + 0.3
618,536 + 1.0
618,576 + 0.2
618,627 - -0.7
618,638 - 0.0
618,641 - -0.4
618,667 + -0.3
618,681 - -0.7
618,710 + -1.9
618,713 - -0.0
618,773 + 0.1
618,931 - 9561 mRNA_1193 0.10 0.3
619,053 + 9561 mRNA_1193 0.16 -0.1
619,270 + 9561 mRNA_1193 0.27 -0.8
619,427 - 9561 mRNA_1193 0.35 0.7
619,428 - 9561 mRNA_1193 0.35 -0.7
619,663 - 9561 mRNA_1193 0.47 -0.4
619,993 - 9561 mRNA_1193 0.64 -1.1
620,167 - 9561 mRNA_1193 0.73 -0.7
620,190 + 9561 mRNA_1193 0.74 -1.0
620,190 + 9561 mRNA_1193 0.74 0.4
620,191 - 9561 mRNA_1193 0.74 -1.3
620,254 - 9561 mRNA_1193 0.77 1.1
620,450 - 9561 mRNA_1193 0.87 2.6
620,542 + 0.1
620,584 - -0.5
620,724 - 0.5
620,875 + -0.3
620,885 + -0.8
621,036 + -1.1
621,055 - -1.1
621,057 + 0.7
621,163 - -0.4
621,192 + -1.3
621,305 + -0.3
621,397 + -2.1
621,398 + -3.2
621,695 - 9562 mRNA_1194 0.22 -0.1