Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1126

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1125: 9493 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 460316 to 462771 9493 mRNA_1126: 9494 - K15334 NCL1, TRM4 multisite-specific tRNA-(cytosine-C5)-methyltransferase, at 463118 to 466210 9494 mRNA_1127: 9495 - K00143 LYS2 L-aminoadipate-semialdehyde dehydrogenase, at 466494 to 471179 9495

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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462,296 + 9493 mRNA_1125 0.81 -0.1
462,310 - 9493 mRNA_1125 0.81 -0.2
462,313 + 9493 mRNA_1125 0.81 -0.2
462,422 + 9493 mRNA_1125 0.86 -0.7
462,428 + 9493 mRNA_1125 0.86 0.4
462,444 + 9493 mRNA_1125 0.87 -0.4
462,574 + -0.2
462,741 + -0.2
462,902 + -0.8
462,906 + 0.0
463,049 - 0.1
463,138 + -0.1
463,281 - 0.9
463,290 + 1.2
463,343 - -0.3
463,723 + 9494 mRNA_1126 0.20 -1.0
464,133 - 9494 mRNA_1126 0.33 0.9
464,252 - 9494 mRNA_1126 0.37 -1.5
465,236 - 9494 mRNA_1126 0.68 0.5
465,244 - 9494 mRNA_1126 0.69 -0.0
465,853 + 9494 mRNA_1126 0.88 0.6
466,275 - -0.5
466,276 + -1.2
466,280 + -1.1
466,284 + -0.4
466,285 + -0.8
466,286 - 0.4
466,286 + -0.7
466,286 - -0.4
466,359 + -0.7
466,359 - -0.0
466,362 + -0.5
466,362 - -0.2
466,362 + 1.2
466,368 - -0.1
466,370 - -0.5
466,371 - -0.1
466,373 + -0.3
466,374 - -0.2
466,387 + -0.7
466,392 + -1.0
466,412 + 0.2
466,422 - -0.9
466,819 - -2.6
466,933 + -3.2
466,951 - -3.1
466,965 + 9495 mRNA_1127 0.10 -1.9