Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1073

Experiments: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1072: 9440 - Hypothetical Protein, at 341677 to 343060 9440 mRNA_1073: 9441 - Hypothetical Protein, at 343845 to 345302 9441 mRNA_1074: 9442 - HMMPfam-Ankyrin repeats (3 copies)-PF12796,ProSiteProfiles-Ankyrin repeat profile.-PS50088,ProSiteProfiles-Ankyrin repeat region circular profile.-PS50297,SUPERFAMILY--SSF48403, at 346068 to 346985 9442

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
342,897 - 9440 mRNA_1072 0.88 0.1
342,924 - -1.1
342,941 - 0.1
343,054 - 0.1
343,085 - -0.7
343,097 - -0.9
343,117 + 1.0
343,120 - -0.3
343,145 + 0.8
343,226 - 0.1
343,243 - -0.4
343,244 - -4.6
343,245 - 0.3
343,253 + -0.9
343,261 - -0.6
343,264 + -0.3
343,273 + -0.9
343,291 - -0.1
343,300 + -0.6
343,326 - -0.9
343,345 - 0.6
343,346 + -0.0
343,375 - -0.9
343,424 - 0.0
343,424 + -0.3
343,451 + -0.8
343,566 + -0.6
343,584 - -0.4
343,693 + -0.6
344,009 + 9441 mRNA_1073 0.11 0.2
344,250 - 9441 mRNA_1073 0.28 -0.1
344,271 + 9441 mRNA_1073 0.29 0.3
344,542 - 9441 mRNA_1073 0.48 -1.8
344,723 - 9441 mRNA_1073 0.60 -2.4
344,837 - 9441 mRNA_1073 0.68 1.8
344,951 + 9441 mRNA_1073 0.76 0.3
345,059 + 9441 mRNA_1073 0.83 -0.7
345,162 - -0.0
345,166 + 2.0
345,257 - 0.4
345,455 - 0.3
345,461 + 0.0
345,640 - 0.1
345,646 + -1.4
345,931 + 0.6
345,934 - -0.7
346,283 - 9442 mRNA_1074 0.23 -2.1