Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_876

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_875: 9243 - KOG2401 Predicted MutS-related protein involved in mismatch repair, at 2086661 to 2088947 9243 mRNA_876: 9244 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 2089626 to 2091862 9244 mRNA_877: 9245 - K07425 CYP4A alkane 1-monooxygenase, at 2092667 to 2095053 9245

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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2,088,649 + 9243 mRNA_875 0.87 -0.9
2,088,826 - -1.7
2,089,375 - 0.1
2,089,516 + -1.5
2,089,851 - 9244 mRNA_876 0.10 -0.2
2,089,966 - 9244 mRNA_876 0.15 -1.7
2,090,685 + 9244 mRNA_876 0.47 -4.0
2,091,287 + 9244 mRNA_876 0.74 -0.7
2,091,323 - 9244 mRNA_876 0.76 -3.5
2,091,554 + 9244 mRNA_876 0.86 -3.3
2,091,717 + -3.1
2,092,031 - 1.7
2,092,153 - 0.1
2,092,159 - -1.1
2,092,163 + -0.2
2,092,307 + -0.2
2,092,323 + 0.1
2,092,447 - 0.0
2,092,562 + 0.2