Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_815

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_814: 9182 - K15075 MET18, MMS19 DNA repair/transcription protein MET18/MMS19, at 1937554 to 1941739 9182 mRNA_815: 9183 - K04555 UBE2G2, UBC7 ubiquitin-conjugating enzyme E2 G2, at 1941867 to 1942865 9183 mRNA_816: 9184 - KOG0783 Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains, at 1943601 to 1948343 9184

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,941,795 + 0.2
1,941,963 + -3.8
1,942,088 + 9183 mRNA_815 0.22 -3.6
1,942,232 - 9183 mRNA_815 0.37 -3.2
1,943,087 + 0.2
1,943,089 + 0.4
1,943,394 - 0.4
1,943,397 + 0.8
1,943,530 - -1.0
1,943,540 - -1.3
1,943,687 - 0.8
1,943,812 - -0.4
1,943,813 - -1.1
1,943,826 - -0.0
1,943,835 + 0.0
1,943,846 + 0.5