Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_699

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_698: 9066 - K12188 SNF8, EAP30 ESCRT-II complex subunit VPS22, at 1668031 to 1668867 9066 mRNA_699: 9067 - K20289 COG2 conserved oligomeric Golgi complex subunit 2, at 1669102 to 1672155 9067 mRNA_700: 9068 - K12398 AP3M AP-3 complex subunit mu, at 1672376 to 1674226 9068

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,668,472 - 9066 mRNA_698 0.53 1.1
1,668,731 + 9066 mRNA_698 0.84 -0.9
1,668,740 + 9066 mRNA_698 0.85 0.0
1,668,908 + -1.1
1,669,057 - -0.5
1,669,063 + -0.5
1,669,201 - 1.4
1,669,637 - 9067 mRNA_699 0.18 1.5
1,669,639 - 9067 mRNA_699 0.18 2.3
1,669,647 + 9067 mRNA_699 0.18 1.7
1,670,565 + 9067 mRNA_699 0.48 2.0
1,670,806 - 9067 mRNA_699 0.56 2.5
1,670,882 + 9067 mRNA_699 0.58 1.9
1,672,224 - 0.2
1,672,354 - 1.8
1,672,363 + -1.1
1,672,367 - 0.2
1,672,660 + 9068 mRNA_700 0.15 -0.7