Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_624

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_623: 8991 - KOG3158 HSP90 co-chaperone p23, at 1495078 to 1496047 8991 mRNA_624: 8992 - K13886 CORO1B_1C_6 coronin-1B/1C/6, at 1496252 to 1498125 8992 mRNA_625: 8993 - K13162 PCBP2_3_4 poly(rC)-binding protein 2/3/4, at 1498815 to 1500137 8993

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,495,420 + 8991 mRNA_623 0.35 -1.3
1,495,461 - 8991 mRNA_623 0.39 -0.7
1,495,736 - 8991 mRNA_623 0.68 -1.9
1,495,751 - 8991 mRNA_623 0.69 -0.9
1,496,011 - -0.2
1,496,229 + -0.5
1,496,487 - 8992 mRNA_624 0.13 -0.0
1,496,523 + 8992 mRNA_624 0.14 1.3
1,496,904 + 8992 mRNA_624 0.35 1.2
1,497,926 - 8992 mRNA_624 0.89 1.3
1,498,049 - 1.5
1,498,197 + -1.3
1,498,216 + 0.7
1,498,219 + 0.2
1,498,337 - -0.1
1,498,477 + 0.6
1,498,479 - -0.9
1,498,495 + -0.0
1,498,666 + -1.1
1,498,667 + -0.6
1,498,795 - -1.1
1,498,800 - -0.8
1,498,823 - 0.8