Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_453

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_452: 8820 - SUPERFAMILY--SSF52047, at 1053191 to 1054789 8820 mRNA_453: 8821 - SUPERFAMILY--SSF52047, at 1055222 to 1056818 8821 mRNA_454: 8822 - Hypothetical Protein, at 1057192 to 1059678 8822

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,054,347 - 8820 mRNA_452 0.72 0.3
1,054,365 - 8820 mRNA_452 0.73 0.2
1,054,475 - 8820 mRNA_452 0.80 -1.5
1,054,486 - 8820 mRNA_452 0.81 -0.5
1,054,487 + 8820 mRNA_452 0.81 0.3
1,054,536 - 8820 mRNA_452 0.84 0.4
1,054,621 - 8820 mRNA_452 0.89 0.0
1,054,636 - 0.0
1,054,705 - -2.6
1,054,708 + 0.2
1,054,720 - -0.4
1,054,728 - 0.4
1,054,730 - 0.3
1,054,796 - 0.6
1,054,800 - 0.8
1,054,805 + 0.1
1,054,808 + 0.5
1,054,823 - -0.3
1,054,824 - -1.1
1,054,843 - -0.7
1,054,851 + -0.8
1,054,867 - 0.2
1,054,907 - -0.8
1,054,935 + -0.3
1,054,971 - 0.6
1,055,211 - -0.6
1,055,561 + 8821 mRNA_453 0.21 -0.3
1,055,577 - 8821 mRNA_453 0.22 -2.8
1,055,779 + 8821 mRNA_453 0.35 0.4
1,056,525 + 8821 mRNA_453 0.82 -0.6
1,056,543 + 8821 mRNA_453 0.83 0.0
1,056,571 + 8821 mRNA_453 0.84 0.1
1,056,791 - 0.0
1,056,804 - -0.8
1,056,812 + -1.1
1,056,819 - 0.3
1,056,914 - -1.3
1,056,958 + 0.4
1,056,973 - -0.7
1,056,976 + 0.2
1,057,122 + 0.9
1,057,123 + -1.6
1,057,286 - 0.2