Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_443

Experiments: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_442: 8810 - K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15, at 1024579 to 1029147 8810 mRNA_443: 8811 - KOG2742 Predicted oxidoreductase, at 1029373 to 1030485 8811 mRNA_444: 8812 - HMMPfam-Transcription factor IIIC subunit delta N-term-PF12657,HMMPfam-Putative zinc-finger of transcription factor IIIC complex-PF12660,SUPERFAMILY--SSF50978, at 1030821 to 1034414 8812

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
1,028,753 + -1.1
1,029,152 - -0.2
1,029,165 - 1.2
1,029,182 - 0.3
1,029,192 + 0.0
1,029,201 - -0.1
1,029,434 - -0.2
1,029,475 - -1.1
1,029,780 + 8811 mRNA_443 0.37 -0.9
1,029,920 + 8811 mRNA_443 0.49 0.5
1,030,203 + 8811 mRNA_443 0.75 0.8
1,030,359 - 8811 mRNA_443 0.89 -0.7
1,030,364 + 8811 mRNA_443 0.89 0.1
1,030,379 + -0.8
1,030,669 - -0.9
1,030,674 + 0.1
1,030,679 + 0.2
1,030,681 + -0.9
1,030,691 + 0.4
1,030,813 + -0.4