Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_395

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_394: 8762 - KOG0714 Molecular chaperone (DnaJ superfamily), at 916716 to 918157 8762 mRNA_395: 8763 - KOG2262 Sexual differentiation process protein ISP4, at 918678 to 921418 8763 mRNA_396: 8764 - K07478 ycaJ putative ATPase, at 921691 to 924142 8764

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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918,268 - -0.7
918,387 - -1.8
918,397 + -0.4
918,410 - 0.2
918,412 - 0.0
918,437 + -1.1
918,548 + -0.7
918,563 - -0.2
918,692 - -2.0
918,693 - 0.5
918,693 + -0.2
918,713 + 0.4
918,817 + 0.5
918,843 + 1.2
918,994 - 8763 mRNA_395 0.12 -1.3
918,997 - 8763 mRNA_395 0.12 -0.4
919,147 - 8763 mRNA_395 0.17 1.1
919,428 + 8763 mRNA_395 0.27 0.9
920,162 + 8763 mRNA_395 0.54 0.2
920,445 - 8763 mRNA_395 0.64 0.4
920,521 - 8763 mRNA_395 0.67 0.7
920,584 - 8763 mRNA_395 0.70 -0.3
921,273 - -0.6
921,349 + 0.6
921,462 + -0.5
921,462 + 0.4
921,758 - -1.4
921,779 + 0.8
921,915 + 0.0
921,944 + 8764 mRNA_396 0.10 -0.7
922,038 - 8764 mRNA_396 0.14 0.8
922,047 - 8764 mRNA_396 0.15 0.5
922,357 - 8764 mRNA_396 0.27 -1.7