Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_213

Experiments: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_212: 8580 - K01194 TREH, treA, treF alpha,alpha-trehalase, at 521112 to 523919 8580 mRNA_213: 8581 - KOG1362 Choline transporter-like protein, at 524056 to 525912 8581

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
523,266 - 8580 mRNA_212 0.77 -0.4
523,296 - 8580 mRNA_212 0.78 0.1
523,386 - 8580 mRNA_212 0.81 -0.8
523,414 - 8580 mRNA_212 0.82 -1.2
523,425 - 8580 mRNA_212 0.82 0.6
523,425 + 8580 mRNA_212 0.82 -0.9
523,431 + 8580 mRNA_212 0.83 0.4
523,431 + 8580 mRNA_212 0.83 0.6
523,469 + 8580 mRNA_212 0.84 0.4
523,484 + 8580 mRNA_212 0.84 -0.9
523,527 + 8580 mRNA_212 0.86 -0.7
523,531 - 8580 mRNA_212 0.86 1.4
523,539 + 8580 mRNA_212 0.86 -0.7
523,551 - 8580 mRNA_212 0.87 1.3
523,554 + 8580 mRNA_212 0.87 0.9
523,562 + 8580 mRNA_212 0.87 -0.2
523,568 + 8580 mRNA_212 0.87 -0.1
523,658 - -0.1
523,659 + 0.1
523,673 + -0.1
523,683 + -0.3
523,707 - -0.8
523,713 + -0.0
523,885 + -0.0
523,887 - 1.2
523,962 - -1.0
523,972 + -0.2
523,973 - 0.4
523,986 - -0.3
524,008 - 0.5
524,024 - 0.5
524,358 + 8581 mRNA_213 0.16 0.2
524,838 - 8581 mRNA_213 0.42 -0.2
524,848 + 8581 mRNA_213 0.43 0.6
524,986 - 8581 mRNA_213 0.50 -0.1
525,470 - 8581 mRNA_213 0.76 -1.1
525,475 + 8581 mRNA_213 0.76 2.2
525,795 + -0.1
526,207 + -0.3
526,371 + -0.1
526,497 - -0.8
526,781 - -0.5
526,786 + -0.5
526,787 + 0.2
526,820 + 0.5