Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_175

Experiments: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_174: 8542 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 426426 to 428792 8542 mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429470 to 431854 8543 mRNA_176: 8544 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 432530 to 433945 8544

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
428,550 + 8542 mRNA_174 0.90 0.2
429,227 + -0.2
429,967 - 8543 mRNA_175 0.21 -0.2
430,153 + 8543 mRNA_175 0.29 -0.9
430,560 - 8543 mRNA_175 0.46 -0.4
430,592 + 8543 mRNA_175 0.47 -0.5
430,975 + 8543 mRNA_175 0.63 -2.1
431,077 - 8543 mRNA_175 0.67 0.4
431,168 + 8543 mRNA_175 0.71 -1.0
431,348 - 8543 mRNA_175 0.79 -0.2
431,449 - 8543 mRNA_175 0.83 2.5
431,611 + 8543 mRNA_175 0.90 -0.7
431,682 + -0.9
431,765 + 0.7
431,780 - -0.2
431,801 - 0.1
431,802 + 0.3
431,817 - 0.8
431,839 + -1.0
431,942 + 0.9
431,952 - -0.4
431,964 + -0.8
431,969 + -0.7
431,969 - -0.3
431,973 + -0.8
431,974 + -0.9
431,978 - 0.4
431,986 + 0.2
431,988 + -0.7
431,990 + -0.4
431,991 + -0.2
431,991 - -1.0
431,997 + 0.8
432,005 - -0.1
432,005 - 0.3
432,013 + 1.5
432,031 + 2.0
432,044 + 0.3
432,045 + 0.0
432,049 + -0.5
432,049 + -1.5
432,054 + 0.4
432,068 + -1.6
432,070 + -0.7
432,072 - -0.8
432,072 - -0.7
432,073 + -0.5
432,079 + -0.0
432,085 + -0.1
432,089 + -0.3
432,093 + -0.3
432,111 + -0.9
432,150 + -2.2
432,151 + -1.1
432,155 + -0.5
432,160 - -1.0
432,167 + 0.1
432,168 + 0.7
432,174 - 0.0
432,181 - 0.3
432,188 + -0.1
432,191 - 0.4
432,193 - 0.6
432,194 + -2.1
432,197 - -0.2
432,202 + 0.1
432,204 - -0.5
432,209 - -0.7
432,211 - -0.6
432,213 - 0.3
432,222 - -0.8
432,224 + 0.5
432,230 + -0.4
432,231 + 1.2
432,267 - -0.5
432,274 - 0.5
432,290 - 0.5
432,330 - -0.7
432,336 - 0.8
432,336 + -0.1
432,337 + -0.2
432,347 + 0.0
432,351 + -1.0
432,365 - -0.1
432,373 - 0.1
432,378 + 0.1
432,388 + 0.3
432,815 - 8544 mRNA_176 0.20 -0.3
432,819 + 8544 mRNA_176 0.20 -0.6
432,830 + 8544 mRNA_176 0.21 -0.2
432,839 - 8544 mRNA_176 0.22 -0.2