Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_159

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_158: 8526 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 392732 to 393571 8526 mRNA_159: 8527 - Hypothetical Protein, at 394494 to 395592 8527 mRNA_160: 8528 - K05349 bglX beta-glucosidase, at 396327 to 398883 8528

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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393,929 - 0.9
393,963 + 1.1
393,967 - -0.2
394,007 + 0.0
394,047 - 0.3
394,061 + -0.5
394,070 + -0.4
394,221 + 0.5
394,222 - -0.3
394,223 - -0.5
394,226 - 0.1
394,228 + -0.6
394,228 + -1.9
394,234 - 0.2
394,236 + -0.1
394,242 - 0.2
394,252 - -0.1
394,259 + -0.3
394,260 + -0.0
394,260 + -3.1
394,263 - -0.6
394,265 + 0.2
394,265 - 0.7
394,288 - 0.3
394,306 - 0.1
394,333 + 0.1
394,361 - 0.2
394,363 + -0.1
394,375 - -0.0
394,375 - 0.0
394,375 - 0.4
394,382 + -1.1
394,382 + -0.3
394,383 - -0.6
394,399 - -0.8
394,407 + 0.2
394,411 - 1.9
394,413 + 1.0
394,419 + 0.9
394,438 - 0.2
394,444 + -0.7
394,445 - 0.2
394,558 - -0.4
394,568 + 0.2
394,570 + -0.7
394,683 - 8527 mRNA_159 0.17 0.4
394,698 + 8527 mRNA_159 0.19 -1.2
394,850 - 8527 mRNA_159 0.32 1.3
394,868 + 8527 mRNA_159 0.34 -1.5
394,966 + 8527 mRNA_159 0.43 0.1
395,058 - 8527 mRNA_159 0.51 -0.5
395,125 - 8527 mRNA_159 0.57 -0.1
395,573 + -0.1
395,686 + -0.2
396,176 + 0.9