Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_63

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_62: 8430 - HMMPfam-HPP family-PF04982, at 145631 to 146829 8430 mRNA_63: 8431 - K01800 maiA, GSTZ1 maleylacetoacetate isomerase, at 147081 to 148199 8431 mRNA_64: 8432 - HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236, at 148573 to 150625 8432

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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146,200 + 8430 mRNA_62 0.47 1.0
146,202 - 8430 mRNA_62 0.48 1.7
146,370 - 8430 mRNA_62 0.62 -2.3
146,493 + 8430 mRNA_62 0.72 0.2
146,518 - 8430 mRNA_62 0.74 -0.3
146,763 + 0.4
146,959 - 0.3
147,238 + 8431 mRNA_63 0.14 -0.5
147,279 - 8431 mRNA_63 0.18 -0.2
147,308 + 8431 mRNA_63 0.20 -0.9
147,574 + 8431 mRNA_63 0.44 0.0
148,110 - -0.5
148,151 + -2.9
148,306 + 0.4
148,419 - 0.2
148,426 - -0.3
148,435 - -0.6
148,437 + -1.1
148,448 - 1.1