Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_18

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_17: 8385 - K00856 E2.7.1.20, ADK adenosine kinase, at 48620 to 50142 8385 mRNA_18: 8386 - KOG1515 Arylacetamide deacetylase, at 50473 to 51921 8386 mRNA_19: 8387 - KOG1399 Flavin-containing monooxygenase, at 52301 to 54654 8387

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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49,948 + 8385 mRNA_17 0.87 -1.6
50,542 + 1.0
50,663 + 8386 mRNA_18 0.13 -2.5
50,904 - 8386 mRNA_18 0.30 0.5
50,943 + 8386 mRNA_18 0.32 -0.2
50,946 - 8386 mRNA_18 0.33 0.2
51,073 - 8386 mRNA_18 0.41 -0.3
51,155 + 8386 mRNA_18 0.47 -0.7
51,432 - 8386 mRNA_18 0.66 0.4
51,550 + 8386 mRNA_18 0.74 -0.9
51,561 - 8386 mRNA_18 0.75 -1.5
51,562 + 8386 mRNA_18 0.75 0.3
51,654 + 8386 mRNA_18 0.82 -0.8
51,655 - 8386 mRNA_18 0.82 0.3
51,845 - 0.5
51,845 + -0.5
51,846 + 2.3
51,962 - 0.2
52,120 + -0.0
52,128 - -1.4
52,132 - -0.3
52,157 + -0.2
52,815 + 8387 mRNA_19 0.22 -1.0
52,819 - 8387 mRNA_19 0.22 -0.3
52,852 - 8387 mRNA_19 0.23 -0.3
52,876 - 8387 mRNA_19 0.24 -0.2
52,889 - 8387 mRNA_19 0.25 0.3
52,897 + 8387 mRNA_19 0.25 -0.6