Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8479

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8478: 16846 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1321525 to 1322743 16846 mRNA_8479: 16847 - Hypothetical Protein, at 1322853 to 1323925 16847 mRNA_8480: 16848 - KOG2174 Leptin receptor gene-related protein, at 1324303 to 1324895 16848

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,321,887 - 16846 mRNA_8478 0.30 1.0
1,321,911 - 16846 mRNA_8478 0.32 -0.2
1,322,071 + 16846 mRNA_8478 0.45 1.9
1,322,441 + 16846 mRNA_8478 0.75 0.8
1,322,768 + -0.2
1,322,820 - 0.3
1,322,828 + -0.9
1,322,830 + -0.8
1,322,833 + 0.2
1,322,908 - -1.0
1,322,961 - 16847 mRNA_8479 0.10 0.2
1,323,274 + 16847 mRNA_8479 0.39 0.6
1,323,379 - 16847 mRNA_8479 0.49 1.3
1,323,379 - 16847 mRNA_8479 0.49 0.9
1,323,541 + 16847 mRNA_8479 0.64 0.0
1,323,712 + 16847 mRNA_8479 0.80 0.5
1,323,731 - 16847 mRNA_8479 0.82 0.7
1,323,989 + 0.7
1,324,037 - -0.2
1,324,115 - 0.3
1,324,254 - -1.2
1,324,264 - -1.5
1,324,281 - 0.2
1,324,304 + -0.7
1,324,316 + 0.4
1,324,599 - 16848 mRNA_8480 0.50 -0.2
1,324,718 - 16848 mRNA_8480 0.70 -0.4
1,324,733 - 16848 mRNA_8480 0.73 -1.0
1,324,863 + -0.5