Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8463

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8463: 16831 - Hypothetical Protein, at 1293991 to 1295181 16831 mRNA_8464: 16832 - Hypothetical Protein, at 1295611 to 1296555 16832

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,293,045 + -0.2
1,293,074 - 0.0
1,293,090 + -0.5
1,293,098 - -0.4
1,293,107 + 1.1
1,293,135 - 0.6
1,293,137 - 0.3
1,293,140 - -1.1
1,293,153 + 0.6
1,293,169 + -0.7
1,293,170 + -0.2
1,293,182 + -0.3
1,293,223 + 0.1
1,293,237 + 0.1
1,293,250 + -0.1
1,293,273 - -1.3
1,293,281 - 0.7
1,293,304 - -0.1
1,293,318 + -0.2
1,293,318 + 0.4
1,293,356 - 0.4
1,293,364 - -0.6
1,293,397 - 0.4
1,293,399 - -0.3
1,293,406 - -1.7
1,293,419 - -0.4
1,293,421 - -1.0
1,293,433 + -0.3
1,293,433 - -0.2
1,293,434 + 0.2
1,293,435 - -0.7
1,293,455 + -0.6
1,293,495 - -1.2
1,293,525 - 0.9
1,293,531 - -1.4
1,293,548 - 0.1
1,293,549 + 0.2
1,293,549 + -0.2
1,293,553 + 1.5
1,293,556 + 0.6
1,293,558 + 1.0
1,293,563 + -0.4
1,293,619 + 0.7
1,293,619 + 0.6
1,293,686 + -2.0
1,293,710 - 0.1
1,293,725 - -0.0
1,293,752 - -0.1
1,293,868 - -0.6
1,294,052 + 1.2
1,294,084 + 0.2
1,294,144 - 16831 mRNA_8463 0.13 -0.9
1,294,163 - 16831 mRNA_8463 0.14 0.5
1,294,310 - 16831 mRNA_8463 0.27 0.3
1,294,334 - 16831 mRNA_8463 0.29 -1.0
1,294,475 + 16831 mRNA_8463 0.41 -0.2
1,294,559 - 16831 mRNA_8463 0.48 0.3
1,294,606 - 16831 mRNA_8463 0.52 0.2
1,294,634 + 16831 mRNA_8463 0.54 0.5
1,294,645 - 16831 mRNA_8463 0.55 -0.0
1,294,741 - 16831 mRNA_8463 0.63 0.9
1,294,795 + 16831 mRNA_8463 0.68 -0.3
1,294,937 - 16831 mRNA_8463 0.79 -0.0
1,294,959 - 16831 mRNA_8463 0.81 1.3
1,295,168 - -0.2
1,295,339 + -0.1
1,295,360 - 1.1
1,295,366 + 0.9
1,295,393 + 0.7
1,295,395 + 1.4
1,295,401 + -0.9
1,295,403 + 0.1
1,295,403 - 0.3
1,295,427 + -0.1
1,295,507 - 0.1
1,295,515 + -0.5
1,295,516 + -2.0
1,295,527 - 0.3
1,295,536 - 0.2
1,295,536 + -0.9
1,295,538 - -0.2
1,295,538 - -0.0
1,295,539 + 0.3
1,295,539 + -0.5
1,295,541 + -0.3
1,295,543 + 0.5
1,295,543 - 0.6
1,295,544 + 0.1
1,295,545 + 0.5
1,295,550 + 0.4
1,295,554 + -0.6
1,295,554 + -0.3
1,295,559 + 0.5
1,295,559 + 0.1
1,295,559 + 0.1
1,295,563 + 0.4
1,295,571 + 0.4
1,295,580 - 0.5
1,295,582 - 0.4
1,295,589 + -0.5
1,295,591 - -0.3
1,295,599 - 0.1
1,295,633 - 0.4
1,295,648 + 0.9
1,295,651 + 1.1
1,295,654 - -0.4
1,295,662 - -1.8
1,295,662 - -0.6
1,295,663 - 0.6
1,295,665 - -0.4
1,295,666 + 1.5
1,295,669 + 0.3
1,295,674 - 0.1
1,295,680 - -0.6
1,295,681 - 0.1
1,295,681 - -0.1
1,295,687 - 0.1
1,295,691 + -0.9
1,295,691 + 0.0
1,295,694 - -0.3
1,295,695 - 0.2
1,295,699 + -0.4
1,295,704 + -0.6
1,295,705 + -0.1
1,295,735 + 16832 mRNA_8464 0.13 0.6
1,295,800 - 16832 mRNA_8464 0.20 -0.1
1,295,815 - 16832 mRNA_8464 0.22 0.0
1,295,823 - 16832 mRNA_8464 0.22 1.2
1,295,831 + 16832 mRNA_8464 0.23 0.3
1,295,840 - 16832 mRNA_8464 0.24 -0.3
1,295,857 - 16832 mRNA_8464 0.26 -0.6
1,295,863 - 16832 mRNA_8464 0.27 -1.3
1,295,869 - 16832 mRNA_8464 0.27 -1.4
1,295,903 - 16832 mRNA_8464 0.31 0.0
1,295,909 - 16832 mRNA_8464 0.32 -0.2
1,295,926 - 16832 mRNA_8464 0.33 -0.1
1,295,930 - 16832 mRNA_8464 0.34 0.3
1,295,953 - 16832 mRNA_8464 0.36 -0.1
1,295,956 + 16832 mRNA_8464 0.37 0.3
1,295,956 + 16832 mRNA_8464 0.37 -0.3
1,295,958 - 16832 mRNA_8464 0.37 1.0
1,295,967 + 16832 mRNA_8464 0.38 0.9
1,295,972 + 16832 mRNA_8464 0.38 -0.1
1,295,974 + 16832 mRNA_8464 0.38 -0.4
1,295,988 + 16832 mRNA_8464 0.40 -0.3
1,295,988 + 16832 mRNA_8464 0.40 0.1
1,296,006 + 16832 mRNA_8464 0.42 -0.2
1,296,011 - 16832 mRNA_8464 0.42 -0.2
1,296,011 - 16832 mRNA_8464 0.42 0.8
1,296,024 + 16832 mRNA_8464 0.44 -0.2
1,296,027 + 16832 mRNA_8464 0.44 -0.6
1,296,028 - 16832 mRNA_8464 0.44 -0.3
1,296,032 + 16832 mRNA_8464 0.45 -0.2
1,296,034 - 16832 mRNA_8464 0.45 0.2
1,296,035 + 16832 mRNA_8464 0.45 0.1
1,296,037 + 16832 mRNA_8464 0.45 -1.0
1,296,038 + 16832 mRNA_8464 0.45 -0.6
1,296,042 - 16832 mRNA_8464 0.46 -0.2
1,296,090 + 16832 mRNA_8464 0.51 -1.2
1,296,106 - 16832 mRNA_8464 0.52 -0.7
1,296,109 - 16832 mRNA_8464 0.53 0.1
1,296,119 + 16832 mRNA_8464 0.54 0.4
1,296,121 - 16832 mRNA_8464 0.54 -0.3
1,296,125 + 16832 mRNA_8464 0.54 -1.4
1,296,128 + 16832 mRNA_8464 0.55 -0.3
1,296,138 - 16832 mRNA_8464 0.56 0.1
1,296,138 - 16832 mRNA_8464 0.56 0.9
1,296,141 - 16832 mRNA_8464 0.56 0.6
1,296,146 + 16832 mRNA_8464 0.57 0.3
1,296,158 + 16832 mRNA_8464 0.58 -0.8
1,296,167 + 16832 mRNA_8464 0.59 -0.4
1,296,168 + 16832 mRNA_8464 0.59 -1.1