Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8428

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8427: 16795 - K11462 EED polycomb protein EED, at 1203788 to 1206558 16795 mRNA_8428: 16796 - KOG3808 Uncharacterized conserved protein, at 1206607 to 1207294 16796 mRNA_8429: 16797 - Hypothetical Protein, at 1207475 to 1209032 16797

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,206,074 - 16795 mRNA_8427 0.82 -1.1
1,206,136 - 16795 mRNA_8427 0.85 -2.1
1,206,336 - -0.4
1,206,341 - -0.7
1,206,349 - -0.2
1,206,364 + -1.3
1,206,379 - -1.5
1,206,385 - -0.4
1,206,401 + 0.0
1,206,483 + -0.8
1,206,674 + -1.6
1,206,678 - 16796 mRNA_8428 0.10 -0.1
1,206,685 + 16796 mRNA_8428 0.11 -0.7
1,207,406 - -1.5
1,207,507 + -1.5
1,207,536 + -0.7
1,207,585 + -1.5
1,207,708 + 16797 mRNA_8429 0.15 -0.9
1,207,727 + 16797 mRNA_8429 0.16 2.4
1,207,839 + 16797 mRNA_8429 0.23 0.7
1,207,852 - 16797 mRNA_8429 0.24 0.4
1,208,027 + 16797 mRNA_8429 0.35 0.9
1,208,254 - 16797 mRNA_8429 0.50 -0.7