Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8426

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8425: 16793 - K06674 SMC2 structural maintenance of chromosome 2, at 1196484 to 1200962 16793 mRNA_8426: 16794 - Hypothetical Protein, at 1201802 to 1203211 16794 mRNA_8427: 16795 - K11462 EED polycomb protein EED, at 1203788 to 1206558 16795

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,201,101 + -0.0
1,201,244 + -0.7
1,201,382 + 1.5
1,201,386 - 0.5
1,201,824 - 0.5
1,201,871 - -0.8
1,202,049 - 16794 mRNA_8426 0.18 0.4
1,202,053 - 16794 mRNA_8426 0.18 0.1
1,202,053 - 16794 mRNA_8426 0.18 -1.6
1,202,060 + 16794 mRNA_8426 0.18 -1.2
1,202,223 - 16794 mRNA_8426 0.30 0.4
1,202,688 - 16794 mRNA_8426 0.63 -0.6
1,202,689 + 16794 mRNA_8426 0.63 -0.3
1,202,708 - 16794 mRNA_8426 0.64 -0.3
1,202,815 - 16794 mRNA_8426 0.72 1.5
1,203,166 - 1.1
1,203,172 + -0.5
1,203,203 + -0.1
1,203,261 - 0.1
1,203,342 + -0.5
1,203,343 + -1.3
1,203,413 - -1.5
1,203,414 + -0.7
1,203,417 - -0.9
1,203,449 - 0.5
1,203,473 + -0.5
1,203,653 - -1.0
1,203,654 - -0.1
1,203,746 - -0.0
1,203,765 - -1.0
1,203,766 + 0.3
1,204,049 - -1.1
1,204,075 + 16795 mRNA_8427 0.10 -0.1
1,204,160 - 16795 mRNA_8427 0.13 0.9
1,204,167 + 16795 mRNA_8427 0.14 0.6