Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8403

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8402: 16770 - K07579 K07579 putative methylase, at 1133086 to 1134230 16770 mRNA_8403: 16771 - K08829 MAK male germ cell-associated kinase, at 1134667 to 1138585 16771 mRNA_8404: 16772 - Hypothetical Protein, at 1139577 to 1141043 16772

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,133,943 + 16770 mRNA_8402 0.75 -1.1
1,133,947 - 16770 mRNA_8402 0.75 -0.3
1,133,987 + 16770 mRNA_8402 0.79 0.3
1,134,006 - 16770 mRNA_8402 0.80 -1.2
1,134,089 + 16770 mRNA_8402 0.88 0.4
1,134,142 - 1.3
1,134,152 - 0.1
1,134,157 - 0.3
1,134,302 + -0.0
1,134,446 + -1.0
1,134,454 + 1.3
1,134,475 + -0.6
1,134,484 - 0.8
1,134,613 + -0.5
1,134,744 - -0.8
1,134,772 + -1.9
1,135,010 + -0.4
1,135,368 + 16771 mRNA_8403 0.18 -0.7
1,135,405 - 16771 mRNA_8403 0.19 -0.2
1,135,577 - 16771 mRNA_8403 0.23 1.0
1,135,916 + 16771 mRNA_8403 0.32 -0.4
1,136,103 + 16771 mRNA_8403 0.37 -1.1
1,136,171 - 16771 mRNA_8403 0.38 -1.9
1,136,406 - 16771 mRNA_8403 0.44 -2.7
1,136,431 - 16771 mRNA_8403 0.45 -1.5
1,136,600 + 16771 mRNA_8403 0.49 -1.6
1,136,918 - 16771 mRNA_8403 0.57 -1.1
1,136,930 - 16771 mRNA_8403 0.58 -3.2
1,137,243 - 16771 mRNA_8403 0.66 -0.1
1,137,342 - 16771 mRNA_8403 0.68 -0.4
1,137,352 + 16771 mRNA_8403 0.69 -1.8
1,137,377 + 16771 mRNA_8403 0.69 -2.1
1,137,606 + 16771 mRNA_8403 0.75 -1.0
1,138,164 + 16771 mRNA_8403 0.89 -1.3
1,138,685 - 1.8
1,138,696 + -0.6
1,138,828 + -0.5
1,138,831 + -0.5
1,138,969 - -0.0
1,138,977 + -0.9
1,138,978 + -0.5
1,138,984 + -1.9
1,138,990 - -0.2
1,139,005 - 0.1
1,139,012 + 0.1
1,139,023 + -0.3
1,139,107 + -2.6
1,139,129 + -0.6
1,139,219 + -1.7
1,139,253 + -1.4
1,139,268 - 0.2
1,139,277 + 0.3
1,139,316 - -0.3
1,139,324 - 0.1
1,139,388 - 0.0
1,139,413 - -0.3
1,139,431 - -1.5
1,139,458 + -0.0
1,139,471 + -0.6
1,139,474 + -0.1
1,139,510 + 0.1
1,139,533 + -0.1