Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8395

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8394: 16762 - KOG3680 Uncharacterized conserved protein, at 1114553 to 1119513 16762 mRNA_8395: 16763 - SUPERFAMILY--SSF52047, at 1119619 to 1120614 16763 mRNA_8396: 16764 - HMMPfam-Ribosomal protein S8-PF00410,SUPERFAMILY--SSF56047, at 1121344 to 1121811 16764

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,118,643 + 16762 mRNA_8394 0.82 0.4
1,118,710 - 16762 mRNA_8394 0.84 1.4
1,118,714 + 16762 mRNA_8394 0.84 -0.1
1,118,726 + 16762 mRNA_8394 0.84 -0.8
1,118,882 - 16762 mRNA_8394 0.87 1.5
1,119,037 + -0.1
1,119,132 + -0.9
1,119,133 + -0.5
1,119,148 + 1.3
1,119,305 - 0.4
1,119,305 - 0.8
1,119,314 + 1.3
1,119,389 - 0.2
1,119,511 + -0.1
1,119,565 + 1.0
1,119,596 + 0.1
1,119,753 + 16763 mRNA_8395 0.13 2.4
1,119,926 + 16763 mRNA_8395 0.31 0.4
1,120,219 - 16763 mRNA_8395 0.60 1.7
1,120,351 + 16763 mRNA_8395 0.73 1.1
1,120,453 - 16763 mRNA_8395 0.84 0.5
1,120,748 - -0.6
1,120,776 - -1.6
1,120,787 + 0.2
1,120,789 + -0.3
1,120,944 + 1.8
1,121,062 - -0.8
1,121,219 - -0.4
1,121,227 + -0.1
1,121,228 + -0.5