Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8354

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8353: 16721 - BLAST Clampless protein 1 [Leucoagaricus sp. SymC.cos], at 1014385 to 1015330 16721 mRNA_8354: 16722 - K07734 paiB transcriptional regulator, at 1015400 to 1016161 16722 mRNA_8355: 16723 - KOG2111 Uncharacterized conserved protein, contains WD40 repeats, at 1016689 to 1018583 16723

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,014,837 + 16721 mRNA_8353 0.48 -0.6
1,014,887 - 16721 mRNA_8353 0.53 1.9
1,014,975 - 16721 mRNA_8353 0.62 -0.7
1,015,090 - 16721 mRNA_8353 0.75 -0.8
1,015,397 - 0.1
1,015,428 - -0.4
1,015,755 + 16722 mRNA_8354 0.47 -0.4
1,015,919 + 16722 mRNA_8354 0.68 -1.0
1,016,043 + 16722 mRNA_8354 0.84 -0.3
1,016,060 + 16722 mRNA_8354 0.87 -1.3
1,016,176 - -3.5
1,016,195 - -1.4
1,016,283 - 0.4
1,016,357 - -0.5
1,016,416 - 0.7
1,016,467 - -0.6
1,016,538 + 0.7
1,016,592 - -0.2
1,016,600 + -0.9
1,016,639 - -0.2
1,016,754 - 0.3
1,017,105 + 16723 mRNA_8355 0.22 0.2
1,017,109 + 16723 mRNA_8355 0.22 0.5